| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0631 |
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| Symbol | fliF |
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| ID | 5387546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 741329 |
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| End bp | 742969 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640863602 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001399623 |
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| Protein GI | 153947902 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAGATA AAATTAAGCA GAAATTGTCA CCTGGTCAAT TAGGTGAAAA TACAAAAACC
ATTCTTATGA GCGCGGCAGC CCTTTTGGTT ACCGCCGCGA TTATTTTCAG CCTCTGGCGT
AGCTCACAGG GCTACACGGC GTTGTTTGGC TCGCAGGAGA ATATCCCGGT CACCCAAGTG
GTGGAAGTGC TGGAAGGAGA GGCCATCGCC TACCGTATTA ACCCGGATAA CGGTCAGGTA
TTGGTGGCTG AAAATCAGTT GGGTAAAGCG CGTATCTTGC TGGCAGCAAA AGGAATTACT
GCCACACTCC CCATTGGCTA TGAGTTGATG GATAAAGAAA GCATGCTTGG CAGCAGCCAG
TTTATCCAAA ATGTTCGTTA TAAACGCAGC CTGGAAGGGG AACTGGCACA GAGCATGATG
GCATTGAGCG CGGTGGAATA TGCCCGAGTC CATCTGGGCA TGAGTGAAGC CAGTTCATTC
GCCATCAGTA ATCGTTCAGA TAACAGTGCC TCGGTGGTGT TACGGCTAAG ATACGGCCAA
ACATTGAGCA CTGAACAGGT GGGGGCCATT GTTCAATTGG TGGCGGGCAG TATTCCCGGA
ATGAAACCTG CCAATGTGCG GGTGGTCGAT CAACACGGTG AATTACTGTC ACAAGCTTAT
CAAGCGAACA GTGAGGGGGT GCCGAGTGTG AAAAGTGGGA CCGAATTAGC TCACTATTTG
CAAAGCACCA CCGAGAAGAA TATCGCAAAC CTGTTGAATT CGGTGATTGG CGCGAATAAC
TACCGCATCA GTGTCTCCAC TCAATTAGAT ATGAGTCGTA TTGAAGAGAC GGCGGAGCGC
TATGGTCCGG ACCCTCGAAT CAATGATGAA AACATCCAGC AGGAGAACAG CAACGACGAC
ATGGCGATGG GGATCCCCGG ATCACTAAGC AATCAGCCCA TCCCTCAATC TCAGGCGGGT
CAAACGCCAG CCGCCGTCAG CCGCAGCCAG GCGCAGCGTA AATATATTTA TGATCGCAAT
ATCCGCCATG TGCGTTATCC GGGTTACAAG CTGGAGAAAA TGACCGTTGC GGTGGTGCTG
AATAAATCGC TCCCGGTGTT GGAACAGTGG ACGCCAGAAC AGCAGGAAGA ACTCAAACGT
TTAATTGAAG ATGCCGCAGG TATTGATGTT AAACGTGGGG ATTCTCTGAC CATTAACGTG
ATGGCCTTCG CGGTCCCTAC GTTGATTGAC GAGCCGGTGA TGCCGTGGTG GCAAGAACCA
AGTACCTTCC GTTGGGCAGA ATTGCTGGGG ATCGGGCTGC TGTCATTACT GGTGCTGTGG
TTTGGTGTTC GCCCATTGAT GAAACGCTAT TCGCGTAAGG GTTCGGAGAA CCTGCCGTTA
GCCATTTCCT CGGCGAGTGC AGATGAGGCG CTTGATCATG TGGATACCGG TGTAGACGGT
GTAGAAAGTA GCCCGCGTGC AGAAACCGCC TTCTCCGCGT CTTCTCTCTG GGAAAGCGAC
GATCTACCAG AGCAAGGCTC CGGTTTGGAA ACCAAAATCG CCCATCTGCA ACAATTGGCG
CAGTCAGAAA CTGAACGTAC CGCCGAAGTC ATTAAACAAT GGATTAACAG TAATGAACGA
ATCAAATCTC AACCTGAATG A
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| Protein sequence | MLDKIKQKLS PGQLGENTKT ILMSAAALLV TAAIIFSLWR SSQGYTALFG SQENIPVTQV
VEVLEGEAIA YRINPDNGQV LVAENQLGKA RILLAAKGIT ATLPIGYELM DKESMLGSSQ
FIQNVRYKRS LEGELAQSMM ALSAVEYARV HLGMSEASSF AISNRSDNSA SVVLRLRYGQ
TLSTEQVGAI VQLVAGSIPG MKPANVRVVD QHGELLSQAY QANSEGVPSV KSGTELAHYL
QSTTEKNIAN LLNSVIGANN YRISVSTQLD MSRIEETAER YGPDPRINDE NIQQENSNDD
MAMGIPGSLS NQPIPQSQAG QTPAAVSRSQ AQRKYIYDRN IRHVRYPGYK LEKMTVAVVL
NKSLPVLEQW TPEQQEELKR LIEDAAGIDV KRGDSLTINV MAFAVPTLID EPVMPWWQEP
STFRWAELLG IGLLSLLVLW FGVRPLMKRY SRKGSENLPL AISSASADEA LDHVDTGVDG
VESSPRAETA FSASSLWESD DLPEQGSGLE TKIAHLQQLA QSETERTAEV IKQWINSNER
IKSQPE
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