Gene YpsIP31758_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0610 
Symbol 
ID5387205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp719838 
End bp721232 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content48% 
IMG OID640863581 
Productfibronectin type III domain-containing protein/ chitin binding domain-containing protein 
Protein accessionYP_001399602 
Protein GI153950069 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA GAACGCCCAA TATTATCAGC CGCAACAAAA GTAATGGTAT CTCTTCGTTT 
CATGGCCACG TGTTTTCTCC CGCTTCACGT GCCTATTTTG CCTGGCTAGC ACATGAAATT
GATGAAGGTG CCCTTAACCA ACGCGAGGCC GGTAAATTTT TCCCTGAAAC AGCCGAGGGC
CTTTCGGACC CCTTTGCACC TGATGATCAG CCTAATAGTT TGCCCCCATT AGACGGAAAA
ATCGCCAGTG CTGGCGAAGA AACTGGGCAA TTTTTGGATG AACCCGGCAC ACACTGGCAG
AAACATGATG TGTTAGCCGG GGATATATTA GAAATATCGT GGCATTATTC CATGAAACAT
AAAGCTCGCC GCTGGAAATA TTTTATGACG CGGACTGATT GGAATCCTAA TCTTCCTCTT
AGCCGAGCTC AGTTTGAAGA TAAACCGTTT TATATGGTTC AACTGAATGA GCAGCCACAC
TGGTCGGTAA ATGCAGAGTT TGCATTAATA CCCATAGACC CAACAATACA TGAGCTAATA
CTGCCGCTGC GCAGCGGTTA TCATGTTTTA CTGGCGGTCT GGGAAGTCGC TAATACCGGC
AATGCTTTTT ATCATGTGAT TGACCTGGAC TTCGTGGGGG AAGGTGGTAG TGATCAACCT
CTGCCACCTG CAAACCTACG TGCGACTAGC ATCACCAAAA ATTCAGTATC ACTTGCCTGG
AATGCCTCCG TTTCTGATGT CGCTCATTAC CAGATTTATC GCGATGGCGT CTTCCTGGCG
CAAACAACTA CATTGAACTG GATTGATTCA AACCTGAAAG CCGGTACCAA ATATATCTAT
ACGGTAAGCA CGATCGATAC AACGGGCATC GCCTCCTCTC TCAGCACGCC TCTGTTGGTA
GAAACACTGG CTGAGAACAG TGACAACGCA CCGCCTTCTG CCCCTAAAAG CTTACATAGC
ATGAACGTAA CCGAGAACAG TCTGGAGTTG ATGTGGGGAA CCTCGACGAG TTCGACTGGG
CTGAAAAGCT ATCTGGTCTA TCGGGAAGGG GAAAAAATTG CGGAAGTTCT GGTACCACAA
TACACGTTCC AAGAGACCGG ATTGTCACCT GATACCACCT ACCGTTATTT TGTCGCAGCA
CAGGATACTC AAGGCCGTTT ATCCGTACCG AGTAATGTCC ATTCTGTTAC AACCCATGCC
AAATCTGATG GTGGTGGTGA TGGTGGTAAT GGCAGTATTC ACCCTGCCTG GGAACTTGGC
GCAACCTATA ACGTTGGCGA TAAAGTCAGC AATTTTAGTA AAGATTGGGT ATGCATATCT
TCCCATACAG CCTATGACCC GGACTGGGCA CCGGGGAGTA TAGACTACCA CACGCTTTGG
ACGCTCATTC CGTAA
 
Protein sequence
MKYRTPNIIS RNKSNGISSF HGHVFSPASR AYFAWLAHEI DEGALNQREA GKFFPETAEG 
LSDPFAPDDQ PNSLPPLDGK IASAGEETGQ FLDEPGTHWQ KHDVLAGDIL EISWHYSMKH
KARRWKYFMT RTDWNPNLPL SRAQFEDKPF YMVQLNEQPH WSVNAEFALI PIDPTIHELI
LPLRSGYHVL LAVWEVANTG NAFYHVIDLD FVGEGGSDQP LPPANLRATS ITKNSVSLAW
NASVSDVAHY QIYRDGVFLA QTTTLNWIDS NLKAGTKYIY TVSTIDTTGI ASSLSTPLLV
ETLAENSDNA PPSAPKSLHS MNVTENSLEL MWGTSTSSTG LKSYLVYREG EKIAEVLVPQ
YTFQETGLSP DTTYRYFVAA QDTQGRLSVP SNVHSVTTHA KSDGGGDGGN GSIHPAWELG
ATYNVGDKVS NFSKDWVCIS SHTAYDPDWA PGSIDYHTLW TLIP