Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0610 |
Symbol | |
ID | 5387205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 719838 |
End bp | 721232 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863581 |
Product | fibronectin type III domain-containing protein/ chitin binding domain-containing protein |
Protein accession | YP_001399602 |
Protein GI | 153950069 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA GAACGCCCAA TATTATCAGC CGCAACAAAA GTAATGGTAT CTCTTCGTTT CATGGCCACG TGTTTTCTCC CGCTTCACGT GCCTATTTTG CCTGGCTAGC ACATGAAATT GATGAAGGTG CCCTTAACCA ACGCGAGGCC GGTAAATTTT TCCCTGAAAC AGCCGAGGGC CTTTCGGACC CCTTTGCACC TGATGATCAG CCTAATAGTT TGCCCCCATT AGACGGAAAA ATCGCCAGTG CTGGCGAAGA AACTGGGCAA TTTTTGGATG AACCCGGCAC ACACTGGCAG AAACATGATG TGTTAGCCGG GGATATATTA GAAATATCGT GGCATTATTC CATGAAACAT AAAGCTCGCC GCTGGAAATA TTTTATGACG CGGACTGATT GGAATCCTAA TCTTCCTCTT AGCCGAGCTC AGTTTGAAGA TAAACCGTTT TATATGGTTC AACTGAATGA GCAGCCACAC TGGTCGGTAA ATGCAGAGTT TGCATTAATA CCCATAGACC CAACAATACA TGAGCTAATA CTGCCGCTGC GCAGCGGTTA TCATGTTTTA CTGGCGGTCT GGGAAGTCGC TAATACCGGC AATGCTTTTT ATCATGTGAT TGACCTGGAC TTCGTGGGGG AAGGTGGTAG TGATCAACCT CTGCCACCTG CAAACCTACG TGCGACTAGC ATCACCAAAA ATTCAGTATC ACTTGCCTGG AATGCCTCCG TTTCTGATGT CGCTCATTAC CAGATTTATC GCGATGGCGT CTTCCTGGCG CAAACAACTA CATTGAACTG GATTGATTCA AACCTGAAAG CCGGTACCAA ATATATCTAT ACGGTAAGCA CGATCGATAC AACGGGCATC GCCTCCTCTC TCAGCACGCC TCTGTTGGTA GAAACACTGG CTGAGAACAG TGACAACGCA CCGCCTTCTG CCCCTAAAAG CTTACATAGC ATGAACGTAA CCGAGAACAG TCTGGAGTTG ATGTGGGGAA CCTCGACGAG TTCGACTGGG CTGAAAAGCT ATCTGGTCTA TCGGGAAGGG GAAAAAATTG CGGAAGTTCT GGTACCACAA TACACGTTCC AAGAGACCGG ATTGTCACCT GATACCACCT ACCGTTATTT TGTCGCAGCA CAGGATACTC AAGGCCGTTT ATCCGTACCG AGTAATGTCC ATTCTGTTAC AACCCATGCC AAATCTGATG GTGGTGGTGA TGGTGGTAAT GGCAGTATTC ACCCTGCCTG GGAACTTGGC GCAACCTATA ACGTTGGCGA TAAAGTCAGC AATTTTAGTA AAGATTGGGT ATGCATATCT TCCCATACAG CCTATGACCC GGACTGGGCA CCGGGGAGTA TAGACTACCA CACGCTTTGG ACGCTCATTC CGTAA
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Protein sequence | MKYRTPNIIS RNKSNGISSF HGHVFSPASR AYFAWLAHEI DEGALNQREA GKFFPETAEG LSDPFAPDDQ PNSLPPLDGK IASAGEETGQ FLDEPGTHWQ KHDVLAGDIL EISWHYSMKH KARRWKYFMT RTDWNPNLPL SRAQFEDKPF YMVQLNEQPH WSVNAEFALI PIDPTIHELI LPLRSGYHVL LAVWEVANTG NAFYHVIDLD FVGEGGSDQP LPPANLRATS ITKNSVSLAW NASVSDVAHY QIYRDGVFLA QTTTLNWIDS NLKAGTKYIY TVSTIDTTGI ASSLSTPLLV ETLAENSDNA PPSAPKSLHS MNVTENSLEL MWGTSTSSTG LKSYLVYREG EKIAEVLVPQ YTFQETGLSP DTTYRYFVAA QDTQGRLSVP SNVHSVTTHA KSDGGGDGGN GSIHPAWELG ATYNVGDKVS NFSKDWVCIS SHTAYDPDWA PGSIDYHTLW TLIP
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