| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0600 |
|---|
| Symbol | |
|---|
| ID | 5385178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 704022 |
|---|
| End bp | 705149 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640863572 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001399593 |
|---|
| Protein GI | 153947860 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.261467 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTAA TTCTCAATAA AGATTTAATC AATAAAAAAG ATAATAGGGA AAAGAGTGCT
GTTGTCATTA TCTCAACCCG AAAAGGGTTA AAAGATAAAA TTTCCGAATA TGTCCGATTG
GCTGATATAA AAAACATCAA AGAAATAGAT GATGATATTT TTAGCGCCGC CTCAATTTTG
ATACCGGATA ATGTGAAAGG AATTATAATA GATATAAATG AGAATCATGA TATCAACACT
ATTCTTGATC TAATGAAAGT TCATACACCA CGGGACTGTT GGTGTATATT AGTCGGTGAT
ATAGACTCTA TTAGCATCGC CCAACAATTT ATTGAGCGTG GCATATTATA TCTACATATC
CAATCACAAT TGGCCGATCT CACACAAAAT TTACTAAAAG GTATCCAAAT AGAGTCAGAT
AGAAAAGCAT TTTTTATCAG TATACTGGGT TGCCGGGGAG GGATAGGCAC GACATTACTC
AGTTACCAAC TGGCGCATGT GATCACCCAA ATAAAAAAAT CGCCTACCTT GTTATTACAA
GGCAATCAAG GCTCGCAAGA TCTCGACTTG ATCACTGAAA AAAAAATGGG CGAAGATATT
ACTGGTTACC AGAAAAATTT TGATCTTATG CGAGGAAACG AAAGAAAACT CAGTGAAGTT
AATGAGCATA ACAATAAAAA ACATAACTTT ATTATTTTCG ATCAACCAAT TCATAATGCA
CGGAAAGAAA AAACACTCGA TTATATCTCT AACTCAAATT GCATCATTCT GCTTATTGAC
CATAGTATGA TGTCCGTTCG TGTAGCGAAA GAGTTTATTG ATACTCTGGA AAGGTTCAAA
AGAGATAATA GACAAGCCAT TAGACTATTT ATTTGCCTTA ACGAAAACAG GCCAATAACA
AAAGATATGT TGACGACTTC TGATATCCAA TCATTATTGG GCCATTCCAT TGATACCGCG
ATACCTTATA TCAACAATGC GAAGAATTCA CTAAATAGCC CTGACTATTT TGGTAGAAAG
AAAACCAAGG TTGTTGAACT GGCAAAACAA TCTTTAGGTA TAAATATAAA TTTATCCTCT
CATACCAATA TGTGGATTAG GGAAAAACTC AATAAATTAT TTAAATAA
|
|---|
| Protein sequence | MQLILNKDLI NKKDNREKSA VVIISTRKGL KDKISEYVRL ADIKNIKEID DDIFSAASIL
IPDNVKGIII DINENHDINT ILDLMKVHTP RDCWCILVGD IDSISIAQQF IERGILYLHI
QSQLADLTQN LLKGIQIESD RKAFFISILG CRGGIGTTLL SYQLAHVITQ IKKSPTLLLQ
GNQGSQDLDL ITEKKMGEDI TGYQKNFDLM RGNERKLSEV NEHNNKKHNF IIFDQPIHNA
RKEKTLDYIS NSNCIILLID HSMMSVRVAK EFIDTLERFK RDNRQAIRLF ICLNENRPIT
KDMLTTSDIQ SLLGHSIDTA IPYINNAKNS LNSPDYFGRK KTKVVELAKQ SLGININLSS
HTNMWIREKL NKLFK
|
|---|
| |