Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0598 |
Symbol | |
ID | 5384893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 701852 |
End bp | 702727 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640863570 |
Product | type II secretion system protein F domain |
Protein accession | YP_001399591 |
Protein GI | 153950598 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTATT ACGTCGTCGC GTTATCCGGT ATTTTATTAC TGGTGCTGAA TAACCTTAAG TGGATGAAAA TAAAGCGCTC AATAAGCAAC ACTAAAAAGA GCAAAGCCAA AAGTACATCT TCTATTACTA TACTGATAAA AAAAATATTT TTCGAATGGA TTGATTACGT ATCAACCCAC AGTAAAAGTA CACCTCATAT ATTATTACCA ATATGTTCAT TGGTGATAGT CTATTATATA AACAGCACTT GGATTAATGT TAATTACTCT TTTGTTTTTA TTATCAACAT CATTTTTATT ATCGTTTTAC AACTAAAATA TGCTCGTTCA AAACATTATT TATTATTTAA GCAAGATTTC CCTGAAGTAC TATTAATGAT TAATATGGCA GCAAGCAGCG GTGCCAGTAT CAATCAAGTA TTGGAACGCT GTGGGAAAGA GATTAGAGGC CCCTTGGGAC AAGAATTAGG GTTGATCTGT CGGCGATTAA ATCTTGGCGA AACCCCTGAA ACCGTTTTTT ATGATGCGTA TGAGCGGTTC CATTATCCAG AATTTTATTT CTTAGTGACA ATCATACTGC TTAATATTCA GCAAGGAGGC CAATTAAAAG AACTGATTAC CCGATTAAGC CAGATAATAA CAAAGAAAAA AACAACCGAA CAAAAGAAGG CCGTCATGAC GGCTCAAATA AGAATGTCGG TTAATATTAT TTCTATCATG CCAATATTAT TTTCTTTTTT ACTTTATCTA CTCGACCCCA CGACGATAGA GTTTGTATGG CAACATCCCA CAGGTAGATT TATTATCTAT TATATTATTA TCAGTGAGGT TATTGGCATA TTTATTATCA GAAAAATGCT AGGTAAATCC CTATGA
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Protein sequence | MIYYVVALSG ILLLVLNNLK WMKIKRSISN TKKSKAKSTS SITILIKKIF FEWIDYVSTH SKSTPHILLP ICSLVIVYYI NSTWINVNYS FVFIINIIFI IVLQLKYARS KHYLLFKQDF PEVLLMINMA ASSGASINQV LERCGKEIRG PLGQELGLIC RRLNLGETPE TVFYDAYERF HYPEFYFLVT IILLNIQQGG QLKELITRLS QIITKKKTTE QKKAVMTAQI RMSVNIISIM PILFSFLLYL LDPTTIEFVW QHPTGRFIIY YIIISEVIGI FIIRKMLGKS L
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