| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0590 |
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| Symbol | metC1 |
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| ID | 5388272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 694348 |
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| End bp | 695559 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640863562 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001399583 |
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| Protein GI | 153949824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTGA ATAAAGCAAT CCCAGAAAAA CTGGAAACAG CCTTAGTCAG CGCAGGGCGA
AGTAAAAAAT TTACTCAAGG CTCGGTGAAT ACCGTGATCC AACGGGCATC ATCTCTGGTT
TTCGAATCCG TAAAAGCGAA AAAACATGCC ACGATCAATC GGGGAAATGG TGAGTTGTTC
TATGGCCGCA GGGGGACATT AACCCACTTC TCTTTGCAAG AGGCAATGAC GGAGCTGGAG
GGCGGCGCAG GTTGCGTGCT TTATCCTTGT GGCGCTGCCG CCATCAGTAA TGCGATTTTA
TCGTTTGTCG CCACGGGCGA TCATGTGCTG ATGACCGGCT CAGCTTATGA GCCCGCCCAA
AGTTTCTGCG ATAAGATTTT ATCGCGCATG AATATCACGA CGACCTATTT TGATCCCATG
ATAGGTGCTG GGATTGCTTC ACTGATTACC CCGAAAACCA AGGTGATATT TCTTGAGTCA
CCCGGCTCTA TCACCATGGA AGTGCAGGAT ATTCCTGCGA TGGTGGCGGC CATCCGGGCG
GTGGCTCCGG ATGTCGTTAT CATGATGGAC AACACCTGGG CCGCAGGTGT GTTATTTAAA
GCACTGGATT TTGATATCGA TATCTCTATT CAATCCGGCA CTAAATACAT TATTGGTCAC
TCTGATGCCA TGCTGGGCAT TGCGGTTGCC AATGCCCGCT GCTGGGAACA ACTGCGTGAA
GACTCTTATT TGATGGGCCA GATGGTCGAT GCTGATACTG CCTATCTTGC CAGCCGGGGC
TTACGCACGT TAAGCGTCCG GTTAAAACAA CATGAGAAAA ACAGCATTGA AATCGCTAAC
TGGTTGGCAG AGCGCCCGGA AGTGGCGGTG GTTTATCATC CCGCACTGCC AGGCTGCAAG
GGCCATGAAT TCTACAAGCG GGATTTTAAT GGCTGCAATG GTTTGTTTTC TTTCGAATTA
AAAGAAGAAT TAACCCAGCA ACAACTGGAG AATTACCTGG ATCACTTTAC CCATTTCAGC
ATGGCGTTTT CATGGGGTGG TTTTGAATCG CTGATATTAG GTTATCAGCC GAAGGATATT
CGTGCGATCC GCAAATATGA CGCGGAAGGC ATCAAAGGAA CATTATTCCG TCTGCATATT
GGCCTTGAGA ATGTGCAAGA TTTGCAAGAC GATCTGGCCG CAGGATTTGA GCGAATTCAA
GCCGTAAAAT AG
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| Protein sequence | MAVNKAIPEK LETALVSAGR SKKFTQGSVN TVIQRASSLV FESVKAKKHA TINRGNGELF
YGRRGTLTHF SLQEAMTELE GGAGCVLYPC GAAAISNAIL SFVATGDHVL MTGSAYEPAQ
SFCDKILSRM NITTTYFDPM IGAGIASLIT PKTKVIFLES PGSITMEVQD IPAMVAAIRA
VAPDVVIMMD NTWAAGVLFK ALDFDIDISI QSGTKYIIGH SDAMLGIAVA NARCWEQLRE
DSYLMGQMVD ADTAYLASRG LRTLSVRLKQ HEKNSIEIAN WLAERPEVAV VYHPALPGCK
GHEFYKRDFN GCNGLFSFEL KEELTQQQLE NYLDHFTHFS MAFSWGGFES LILGYQPKDI
RAIRKYDAEG IKGTLFRLHI GLENVQDLQD DLAAGFERIQ AVK
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