Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0578 |
Symbol | parE |
ID | 5386148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 677394 |
End bp | 679289 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863550 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_001399571 |
Protein GI | 153950532 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT CCAGCTATAA CGCTGATGCC ATTGAAGTAC TCAGCGGTCT AGAACCAGTG CGTCGTCGTC CAGGAATGTA TACGGACACC TCGCGGCCAA ACCACCTCGG TCAAGAGGTG ATTGATAACA GCGTCGATGA GGCGCTGGCT GGTCATGCCC GTCGTATTGA CGTCATTTTA CACGCCGATC AATCACTCGA AGTGATTGAT GATGGCCGTG GGATGCCGGT TGATATCCAC CCAGAGGAGG GGGTTCCTGC TGTTGAACTG ATTTTATGTC GGTTACATGC GGGCGGTAAA TTCTCCAATA AGAACTATCA GTTTTCTGGT GGTTTGCACG GTGTGGGTAT TTCAGTTGTT AACGCCTTAT CCAAGCGGGT AGAAGTCACG GTACGCCGTG ATAGTCAAAT CTACAGTATC GCTTTTGAAA ATGGCGATAA AGTCCAGGAT TTACAGGTTA TTGGGACGTG CGGTAAGCGC AATACTGGCA CCAGTGTGCA TTTCTGGCCG GACGTCTCTT TCTTTGATAG CCCGCGTTTT TCGGTTTCTC GTCTATCCCA TTTACTGAAA GCCAAAGCGG TATTGTGTCC AGGCGTCGAG ATCGTTTTTA AAGATCAGGT CAACAACACA GAACAGCGTT GGTGTTATGC CGATGGTCTA ACCGATTATC TGATGGAAGC GGTTAACGGC TTTATTACTC TGCCAGAAGC ACCCTTTGTG GGGTCTTTTG CGGGTGATAC AGAAGCTATC GACTGGGCAT TACTGTGGTT GCCAGAAGGC GGCGAACTGC TGACTGAAAG CTACGTTAAC CTGATCCCAA CCATGCAGGG CGGTACCCAC GTTAATGGCT TGCGTCAGGG GTTGCTGGAT GCCATGCGCG ATTTCTGTGA ATACCGCAAT ATCTTGCCTC GCGGAGTCAA GCTCTCGGCA GATGATATCT GGGAACGCTG TGCTTATGTG TTATCGGTAA AAATGCAGGA TCCACAGTTC GCGGGTCAGA CGAAAGAGCG GCTCTCCTCA CGTCAATGTG CGGCTTTTGT CTCCGGTGTT GTCAAAGATG CCTTCAGCTT ATGGTTAAAC CAGAATGTGC AGGCCGCAGA ACAACTGGCT GAACTGGCGA TTTCCAGCGC TCAGCGTCGT ATGCGTGCAG CAAAAAAAGT GGTGCGTAAA AAACTGACCA GTGGCCCGGC ACTGCCTGGC AAACTGGCAG ATTGTACTTC GCAGGACTTG AGCCTCACAG AGCTATTTTT GGTGGAAGGG GATTCCGCCG GCGGTTCCGC GAAACAAGCC CGCGACCGGG AATATCAGGC GATCATGCCG TTGAAAGGCA AGATCTTGAA CACTTGGGAG GTCTCCTCTG ATGAAGTCCT GGCCTCGCAG GAAGTTCACG ATATTTCCGT GGCGATCGGT ATTGATCCTG ATAGCGAAGA CTTAAGCCAG TTACGTTACG GTAAAGTGTG CATTCTGGCG GATGCGGACT CCGATGGCCT GCATATTGCC ACGTTGCTGT GCGCACTGTT TGTGCGTCAC TTCCGGGCAC TGGTCCGTAA TGGTCATGTG TATGTGGCGA TGCCGCCGTT GTACCGTATC GATCTAGGCA AAGAGGTCTT TTACGCGCTG GATGAAGAAG AGAAAGCCGG TGTGCTTGAG CAACTGAAAC GCAAACGGGG TAAACCTAAC GTTCAGCGTT TCAAAGGGTT GGGTGAAATG AACCCATTAC AATTGCGTGA AACCACCCTT GATCCCAATA CCCGCCGTCT GGTGCAATTG ACCATCAGTG ATGATGATAT TGATCACACT CTGGCCGTTA TGGATATGTT GTTGGCAAAG AAACGCTCGG AAGATCGCCG CAACTGGCTA CAAGAGAAAG GGGATACTGC TGAGATCGAG GTCTGA
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Protein sequence | MTESSYNADA IEVLSGLEPV RRRPGMYTDT SRPNHLGQEV IDNSVDEALA GHARRIDVIL HADQSLEVID DGRGMPVDIH PEEGVPAVEL ILCRLHAGGK FSNKNYQFSG GLHGVGISVV NALSKRVEVT VRRDSQIYSI AFENGDKVQD LQVIGTCGKR NTGTSVHFWP DVSFFDSPRF SVSRLSHLLK AKAVLCPGVE IVFKDQVNNT EQRWCYADGL TDYLMEAVNG FITLPEAPFV GSFAGDTEAI DWALLWLPEG GELLTESYVN LIPTMQGGTH VNGLRQGLLD AMRDFCEYRN ILPRGVKLSA DDIWERCAYV LSVKMQDPQF AGQTKERLSS RQCAAFVSGV VKDAFSLWLN QNVQAAEQLA ELAISSAQRR MRAAKKVVRK KLTSGPALPG KLADCTSQDL SLTELFLVEG DSAGGSAKQA RDREYQAIMP LKGKILNTWE VSSDEVLASQ EVHDISVAIG IDPDSEDLSQ LRYGKVCILA DADSDGLHIA TLLCALFVRH FRALVRNGHV YVAMPPLYRI DLGKEVFYAL DEEEKAGVLE QLKRKRGKPN VQRFKGLGEM NPLQLRETTL DPNTRRLVQL TISDDDIDHT LAVMDMLLAK KRSEDRRNWL QEKGDTAEIE V
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