Gene YpsIP31758_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0574 
SymbolnudF 
ID5386856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp674712 
End bp675344 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content49% 
IMG OID640863546 
ProductADP-ribose pyrophosphatase NudF 
Protein accessionYP_001399567 
Protein GI153948032 
COG category 
COG ID 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAA AGCAATCCTC ACCGGTGACT TTTGACAAGA ATGATGTGGA AATTATTGCA 
CGTGAGTCAC TGTATCGGGG TTTTTTTTCA CTGAATTCAT ATCGGTTTCG CCATCGCTTG 
TTTAATGGTG AAATGAGCGG TGAGGTCAAG CGCGAAATTT TTGAGCGTGG TCATGCCGCA 
GTACTACTGC CTTATGATCC ACAGCGCGAT GAAGTGGTAT TGGTTGAACA ATTACGCATT 
GCGGCCATTG ATAGCGCGGT TTCTCCTTGG TTATTAGAAA TGGTCGCCGG GATGATTGAG 
GAGGGGGAAA GCGTTGAAGA GGTCGCCCGG CGCGAGGCAG AAGAAGAGGC GGGAATTCAG 
GTTGGTCGCT GTAAACCCGT ACTCAGTTAT TTAGCCAGCC CCGGTGGTAC CAGTGAGCGT 
TTATCCATTA TGGTCGGTGA AGTTGATGCG ACGACCGCGA GCGGTATTCA TGGCTTAGCC 
GAAGAAAATG AAGATATTCG GGTGCATGTT GTCAGCCGCG AACAAGCCTA TCGTTGGGTT 
GAAGAAGGTG TGATTGATAA CGCCGCTTCA GTCATTGCAT TACAGTGGCT GGCGTTGCAC 
CATCAAGCGC TAAGAGCTGA ATGGCAGCGA TAG
 
Protein sequence
MTSKQSSPVT FDKNDVEIIA RESLYRGFFS LNSYRFRHRL FNGEMSGEVK REIFERGHAA 
VLLPYDPQRD EVVLVEQLRI AAIDSAVSPW LLEMVAGMIE EGESVEEVAR REAEEEAGIQ 
VGRCKPVLSY LASPGGTSER LSIMVGEVDA TTASGIHGLA EENEDIRVHV VSREQAYRWV 
EEGVIDNAAS VIALQWLALH HQALRAEWQR