| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0570 |
|---|
| Symbol | |
|---|
| ID | 5385779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 669576 |
|---|
| End bp | 670358 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640863542 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001399563 |
|---|
| Protein GI | 153947904 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT TTCGTATGCC TGCACTGTTT CTCGGCCACG GTAGCCCGAT GAACGTGCTG
GAAGAAAATA GTTACACTCA GGCATGGCGT ACGCTAGGTG AAACATTACC GCGTCCAAAG
ATGATTTTGG CAATTTCTGC CCATTGGTAT ACCCGTGGTA CGGCGGTAAC TGCGATGGAA
CATCCCCGGA CAATTCACGA TTTTGGTGGG TTTCCACAGG CGCTATTTGA TATACAGTAT
CCGGCTCCTG GCTCCCCTGA ACTCGCGGCG CATATTCAAC AACTGCTGGC CCCTACACCG
GTACGGGCTG ATACCGGTGA GTGGGGGCTG GACCATGGTA GCTGGGGCGT ATTAATCAAA
ATGTACCCTG AGGCTGATAT CCCAGTGGTA CAACTGAGTA TCGATGGTAC GCAGCCTGCG
GCTTATCATT ATGAATTAGG CCAGAAACTG GCAGCATTAC GTGAACAGGG CGTGATGATT
GTTGCCAGCG GTAACGTGGT ACATAACCTG CGTCTGGGCA AATGGCAGGG TGAGAGCAGT
CCATATCCAT GGGCGGAGTC TTTCAATCAA TTTGTACGGG ATAATTTAAG TTATCAAGGG
GATGACCACC CGCTGGTTAA CTTTATGCAA CATGAAGGCG CGGCATTATC CAATCCATCG
CCAGAGCATT ATTTGCCATT GCTGTATGTG CTAGGGAGTT GGGATGGTAA AGAGCCGGTT
TCGATCCCGA CGGATGGGGT TGAGATGGGG TCGTTAAGTA TGTTGTCGGT GCAAATCGGC
TAA
|
|---|
| Protein sequence | MNTFRMPALF LGHGSPMNVL EENSYTQAWR TLGETLPRPK MILAISAHWY TRGTAVTAME
HPRTIHDFGG FPQALFDIQY PAPGSPELAA HIQQLLAPTP VRADTGEWGL DHGSWGVLIK
MYPEADIPVV QLSIDGTQPA AYHYELGQKL AALREQGVMI VASGNVVHNL RLGKWQGESS
PYPWAESFNQ FVRDNLSYQG DDHPLVNFMQ HEGAALSNPS PEHYLPLLYV LGSWDGKEPV
SIPTDGVEMG SLSMLSVQIG
|
|---|
| |