| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0567 |
|---|
| Symbol | ribB |
|---|
| ID | 5387361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 668481 |
|---|
| End bp | 669134 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640863539 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_001399560 |
|---|
| Protein GI | 153950377 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA CGCTTCTCTC AGATTTTGGC ACGCCTGTTG AGCGTGTAGA ACGTGCAATC
GACGCCCTGC GTAATGGCCG TGGCGTTATG GTGTTGGATG ACGAAAGTCG TGAAAACGAA
GGCGATATGG TTTTTGCTGC TGAAGCAATG ACGCTAGAGC AAATGGCTCT GACCATCCGC
CACGGTAGTG GCATTGTCTG TCTGTGTATC ACTGATGAAC GCCGCCAGCA GCTTGATTTA
CCCATGATGG TTACCCATAA CTCCAGCCAA TTCCAGACAG CGTTTACCGT GACAATTGAA
GCGGCGGAAG GTGTGACGAC TGGGGTTTCT GCGGCTGACC GTCTGACCAC TATCCGTAAG
GCAATCGCTG ATAATGCTAA ACCTGCTGAT CTTAATCGGC CGGGGCATGT ATTCCCGCTG
CGTGGTCAAC CTGGTGGCGT ATTATCACGC CGTGGTCATA CCGAAGCGTC TATCGATTTG
GCGACACTGG CAGGTTACAA ACCGGCTGGT GTGCTGTGTG AACTGACCAA TGACGACGGT
AGCATGGCTC ATGCTCCAGA AGTGATTGCG TTTGCTAAAT TGCATGATAT GCCCGTCGTG
ACGATTGACG ATTTGGCGGC TTATCTCCAA TCTCGCGCGA AGAAAGCCAG CTAA
|
|---|
| Protein sequence | MNQTLLSDFG TPVERVERAI DALRNGRGVM VLDDESRENE GDMVFAAEAM TLEQMALTIR
HGSGIVCLCI TDERRQQLDL PMMVTHNSSQ FQTAFTVTIE AAEGVTTGVS AADRLTTIRK
AIADNAKPAD LNRPGHVFPL RGQPGGVLSR RGHTEASIDL ATLAGYKPAG VLCELTNDDG
SMAHAPEVIA FAKLHDMPVV TIDDLAAYLQ SRAKKAS
|
|---|
| |