Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0560 |
Symbol | cca |
ID | 5387781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 657779 |
End bp | 659017 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640863532 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_001399553 |
Protein GI | 153947017 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000000131673 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCT ACCTGGTCGG CGGAGCCGTA CGCGATAGCT TATTAAACCT GCCCGTGACC GAACAGGACT GGGTCGTGGT AGGGGCGACC CCTGAACAAT TACTGAAATT AGGGTATCAG CAGGTCGGTA AAGACTTTCC GGTCTTCCTG CACCCCGTCA GCCATGAAGA ATACGCCCTA GCGCGTACTG AACGTAAATC CGGCCAGGGC TACACCGGTT TTACCTGCTA TGCCGCTCCC GATGTCACGC TGGAAGATGA TTTATTACGC CGCGATTTAA CCGTTAATGC CATTGCCCGT AGTGCTGACG GGGAATTTAT CGATCCCTAC CATGGCAAAC AGGACTTGGA AAACCGAGTG TTACGCCATG TCTCCGACGC ATTTGGTGAG GATCCATTGC GCGTTCTGCG GGTGGCACGC TTTGCCGCCC GTTTTGCCTA CCTTGGTTTC ACCATCGCCC CAGAAACGAT GTCTCTGATG AGCAATATGG CGCAGAGTGG CGAACTCTCC GCCCTAACAC CAGAGCGCGT GTGGAAAGAA ACCGAGAAAG CACTGAAAAC GCAAAGCCCA CACGTCTATT TTCAGGTACT TCGGGATTGC GGTGCGTTGG CGGTGCTGTT CCCTGAGATT GAGCGTTTAT TTGGGGTGCC GGCACCGGAG AAATGGCACC CGGAAATTGA TACCGGTATC CATACTCTGA TGACGTTGGC TATCGCTGCA CAGCTCAGCC CGGAGGTTGA TATACGCTTT GCTGCCCTGT GCCACGATTT GGGGAAAGGC CTAACCCCCA AAGAGCATTG GCCACATCAT CACGGCCATG GTCCGGCTGG CGTCAAATTA GTTGAGCAAC TGTGCCAACG GTTGCGGATC CCTAACCCTG TGCGTGATTT GGCTAAGCTC GTCGCGGAAT ACCATGACCT AATTCATACA GTGAATAAAC TCCGGCCAGA AACTCTGCTA AAACTGTTTA ATGCCATTGA TGTATGGCGT AAACCTGAGC GCCTGGAGCA GATGATTATG ACCAGCGAAG CGGATGCCCG TGGCCGGACT GGATTTGAAA ACAATCCCTA TCCACAAGGG GATTATCTGC GGGCCGCCTT CCAGATTGCC AACGGAGTAT CAATACAGGA AGTGGTCGCC AGCGGGTTAC AAGGCTTGGC TATTCGCGAC GAACTTCAAC GCCGCCGCCA GCAAGCTCTG GCCGAGTGGA AACAGACTCA GGAAACACCT TTAATATAA
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Protein sequence | MNIYLVGGAV RDSLLNLPVT EQDWVVVGAT PEQLLKLGYQ QVGKDFPVFL HPVSHEEYAL ARTERKSGQG YTGFTCYAAP DVTLEDDLLR RDLTVNAIAR SADGEFIDPY HGKQDLENRV LRHVSDAFGE DPLRVLRVAR FAARFAYLGF TIAPETMSLM SNMAQSGELS ALTPERVWKE TEKALKTQSP HVYFQVLRDC GALAVLFPEI ERLFGVPAPE KWHPEIDTGI HTLMTLAIAA QLSPEVDIRF AALCHDLGKG LTPKEHWPHH HGHGPAGVKL VEQLCQRLRI PNPVRDLAKL VAEYHDLIHT VNKLRPETLL KLFNAIDVWR KPERLEQMIM TSEADARGRT GFENNPYPQG DYLRAAFQIA NGVSIQEVVA SGLQGLAIRD ELQRRRQQAL AEWKQTQETP LI
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