Gene YpsIP31758_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0560 
Symbolcca 
ID5387781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp657779 
End bp659017 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content53% 
IMG OID640863532 
Productmultifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 
Protein accessionYP_001399553 
Protein GI153947017 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000131673 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCT ACCTGGTCGG CGGAGCCGTA CGCGATAGCT TATTAAACCT GCCCGTGACC 
GAACAGGACT GGGTCGTGGT AGGGGCGACC CCTGAACAAT TACTGAAATT AGGGTATCAG
CAGGTCGGTA AAGACTTTCC GGTCTTCCTG CACCCCGTCA GCCATGAAGA ATACGCCCTA
GCGCGTACTG AACGTAAATC CGGCCAGGGC TACACCGGTT TTACCTGCTA TGCCGCTCCC
GATGTCACGC TGGAAGATGA TTTATTACGC CGCGATTTAA CCGTTAATGC CATTGCCCGT
AGTGCTGACG GGGAATTTAT CGATCCCTAC CATGGCAAAC AGGACTTGGA AAACCGAGTG
TTACGCCATG TCTCCGACGC ATTTGGTGAG GATCCATTGC GCGTTCTGCG GGTGGCACGC
TTTGCCGCCC GTTTTGCCTA CCTTGGTTTC ACCATCGCCC CAGAAACGAT GTCTCTGATG
AGCAATATGG CGCAGAGTGG CGAACTCTCC GCCCTAACAC CAGAGCGCGT GTGGAAAGAA
ACCGAGAAAG CACTGAAAAC GCAAAGCCCA CACGTCTATT TTCAGGTACT TCGGGATTGC
GGTGCGTTGG CGGTGCTGTT CCCTGAGATT GAGCGTTTAT TTGGGGTGCC GGCACCGGAG
AAATGGCACC CGGAAATTGA TACCGGTATC CATACTCTGA TGACGTTGGC TATCGCTGCA
CAGCTCAGCC CGGAGGTTGA TATACGCTTT GCTGCCCTGT GCCACGATTT GGGGAAAGGC
CTAACCCCCA AAGAGCATTG GCCACATCAT CACGGCCATG GTCCGGCTGG CGTCAAATTA
GTTGAGCAAC TGTGCCAACG GTTGCGGATC CCTAACCCTG TGCGTGATTT GGCTAAGCTC
GTCGCGGAAT ACCATGACCT AATTCATACA GTGAATAAAC TCCGGCCAGA AACTCTGCTA
AAACTGTTTA ATGCCATTGA TGTATGGCGT AAACCTGAGC GCCTGGAGCA GATGATTATG
ACCAGCGAAG CGGATGCCCG TGGCCGGACT GGATTTGAAA ACAATCCCTA TCCACAAGGG
GATTATCTGC GGGCCGCCTT CCAGATTGCC AACGGAGTAT CAATACAGGA AGTGGTCGCC
AGCGGGTTAC AAGGCTTGGC TATTCGCGAC GAACTTCAAC GCCGCCGCCA GCAAGCTCTG
GCCGAGTGGA AACAGACTCA GGAAACACCT TTAATATAA
 
Protein sequence
MNIYLVGGAV RDSLLNLPVT EQDWVVVGAT PEQLLKLGYQ QVGKDFPVFL HPVSHEEYAL 
ARTERKSGQG YTGFTCYAAP DVTLEDDLLR RDLTVNAIAR SADGEFIDPY HGKQDLENRV
LRHVSDAFGE DPLRVLRVAR FAARFAYLGF TIAPETMSLM SNMAQSGELS ALTPERVWKE
TEKALKTQSP HVYFQVLRDC GALAVLFPEI ERLFGVPAPE KWHPEIDTGI HTLMTLAIAA
QLSPEVDIRF AALCHDLGKG LTPKEHWPHH HGHGPAGVKL VEQLCQRLRI PNPVRDLAKL
VAEYHDLIHT VNKLRPETLL KLFNAIDVWR KPERLEQMIM TSEADARGRT GFENNPYPQG
DYLRAAFQIA NGVSIQEVVA SGLQGLAIRD ELQRRRQQAL AEWKQTQETP LI