| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0556 |
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| Symbol | gcp |
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| ID | 5385555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 654075 |
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| End bp | 655088 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640863528 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001399549 |
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| Protein GI | 153948467 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000000141233 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGTAT TGGGTATAGA AACGTCCTGC GATGAAACCG GAATTGCAGT CTATGACGAT
AAAGCCGGTC TGTTAGCTAA CCAATTGTAC AGTCAGGTAA AATTACACGC TGACTACGGT
GGTGTCGTAC CTGAACTGGC CTCCCGTGAT CACGTGCGTA AGACCGTACC CCTGATTCAG
GCGGCGTTGA AAGAAGCCAA TTTGAGCGCC AAAGATATCG ATGCGGTGGC TTATACAGCA
GGCCCTGGTT TGGTGGGGGC GTTGTTAGTG GGGGCGACCA TTGGTCGGGC ATTAGCTTTC
GCATGGGGAG TCCCTGCGGT ACCGGTTCAT CATATGGAAG GCCATTTGTT GGCACCAATG
CTGGAAGAAA ATGCACCAGA GTTCCCGTTT GTTGCGCTGC TGGTATCCGG CGGCCATACC
CAATTGATTA GTGTGACCGG TATTGGTGAA TATTTGCTGT TGGGCGAATC TGTTGATGAT
GCGGCAGGCG AGGCCTTTGA TAAGACAGCA AAACTACTAG GGCTGGATTA CCCCGGTGGG
CCAATGTTGT CGCGTATGGC TCAACAAGGT ACTGTGGGGC GTTTTACCTT TCCGCGCCCA
ATGACTGATC GCCCTGGGCT GGATTTTAGT TTTTCCGGCC TGAAAACGTT CGCGGCGAAT
ACTATTCGTG CTAATGGTGA TGATGACCAA ACCCGTGCCG ATATCGCCCG AGCATTCGAA
GATGCGGTGG TTGATACGTT GGCGATCAAG TCTAAACGTG CATTAGATCA GACGGGTTTT
AAACGCTTAG TCATTGCCGG GGGCGTGAGC GCTAACCAGA CACTGCGATT AAAACTGGCC
GATATGATGC AAAAACGAGG CGGTGAAGTA TTCTATGCCC GACCCGAATT TTGCACTGAC
AATGGCGCGA TGATTGCCTA TGCCGGGATG GTCAGGTTGC GAAGTAACCT GAACAGTGAG
TTGAGTGTGT CGGTGCGGCC GCGGTGGCCG TTATCTGAGT TACCAAAAGT CTGA
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| Protein sequence | MRVLGIETSC DETGIAVYDD KAGLLANQLY SQVKLHADYG GVVPELASRD HVRKTVPLIQ
AALKEANLSA KDIDAVAYTA GPGLVGALLV GATIGRALAF AWGVPAVPVH HMEGHLLAPM
LEENAPEFPF VALLVSGGHT QLISVTGIGE YLLLGESVDD AAGEAFDKTA KLLGLDYPGG
PMLSRMAQQG TVGRFTFPRP MTDRPGLDFS FSGLKTFAAN TIRANGDDDQ TRADIARAFE
DAVVDTLAIK SKRALDQTGF KRLVIAGGVS ANQTLRLKLA DMMQKRGGEV FYARPEFCTD
NGAMIAYAGM VRLRSNLNSE LSVSVRPRWP LSELPKV
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