Gene YpsIP31758_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0539 
Symbol 
ID5386902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp638521 
End bp639972 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content44% 
IMG OID640863510 
ProductNa+/H+ antiporter family protein 
Protein accessionYP_001399532 
Protein GI153948910 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATG AAGGACTCAT TTTTCGCGGC GGAAAAAATA TGGCATTACT GCCGATGCTG 
CTTTTTATTG TGTCGTGTTC ACTATTCTTT TCAGTTTTCC ATGTCTTTGA CATGACCGCA
TTGGCGATGC TCGCATTTCT TGCAATTATG ATAGGGGCAA TCTTTTCACG TAATGTTAGT
CATTATTGGA AAGCCGTTAT TTCTGAAGGT ATTGGCAGTG AAATGGCTGT CACTATTGCT
ACAATCCTAT TAATTATCGG CATGTATGCG AAAATGATCG CTCAGTCCGG TGTTGCAGAT
AGTTTTGCCC TGTTGGCGAA TCATCTGGGA TTGCATGGCG GCGCTTTTAC ATTATTTACT
TTTATTTCTG TTTGTATTGT CGCCACGGCA ACGGGGACAT CGGTAGGAAC GCTATTTACT
GCTTTCCCCG TATTTTATCC TTCCGGCATT TTACTGGGGG CAGATCCTGT TGTATTAGCC
AGTGCTATTC TGTGTGGTGC TATTTTTGGC GACAATATTG CCCCAATATC GGATACCACA
GTTGCATCCT CCTCAACCCA AACTTACAAG CATAAGCCAG GTAGCGCGGA AATTGCAGGT
GTAGTCGCCG CGCGTTTTCG ATTTGCGATA GTCAGTGCTA TCATCGCGGG AGCTCTATTT
TATTTCTTAG GCTCCAATAA TATACCTCTC GCAGAAAGCA GCCTTGTCCG CGATAGTCAG
GCATCTTACC GAAGTTTATG GATGCTGGTT CCTATGGCGG TACTGTTAAT TGTTGCGATG
AAAACTCGTA ATATCTTTAA AGCGATCCCT TCAGGGATAC TCACAGGGAT AATTATCGGT
TTACTGTCCG GTATTTTTAA CTTCACGGAT ATATTTGCAC TGGATAACGG GAATGTCACC
GGTTTTCTGT ACAATGGATT CCATGAGATG GTCAGTACTA TTCTCTTTGT CCTTTCTTTG
TTTGGCATCA TTGGTATTCT GCGTGCCAGT AAAACCATGG ATCGTATTTC TGCGGCTATC
TGTAGTAGTC GACTGGCTCA ATCAGCTCAA GGCGCAGAAT GGTGTATTGC TATTGGCTCC
ATTATCGCAA CCGCATTAGT TGGCGGTGTA ACCAGCGCAT CTATTTTGGC TTTTGGTCCT
GTAGCTAATG AAATCGGGTT ACGTAAGTCA TTACACCCCT ATCGTCGCGC GGTCCTGGTT
GACTGTTTTG CCATGACTCT GGCAGCGATC ATTCCCTTCC TTAGTGCTTT TATTTTTATA
GTCAGTGCGA TCATCAGTTC TTTACAAAAA GAATATCCAT TTATTCAACC AGTTAACCCC
ATTGATCTTT CACTGGCAGC TTTCTATCCT CTGACACTTT TCGTCGTGAT GTCATTCTCG
ATCATCGTTG GTTGGGGGCG TAGCTTTGAA AGTAAAGATG GTTCATTAGT CAAGAGTCTC
CCCCTAAATT AA
 
Protein sequence
MDNEGLIFRG GKNMALLPML LFIVSCSLFF SVFHVFDMTA LAMLAFLAIM IGAIFSRNVS 
HYWKAVISEG IGSEMAVTIA TILLIIGMYA KMIAQSGVAD SFALLANHLG LHGGAFTLFT
FISVCIVATA TGTSVGTLFT AFPVFYPSGI LLGADPVVLA SAILCGAIFG DNIAPISDTT
VASSSTQTYK HKPGSAEIAG VVAARFRFAI VSAIIAGALF YFLGSNNIPL AESSLVRDSQ
ASYRSLWMLV PMAVLLIVAM KTRNIFKAIP SGILTGIIIG LLSGIFNFTD IFALDNGNVT
GFLYNGFHEM VSTILFVLSL FGIIGILRAS KTMDRISAAI CSSRLAQSAQ GAEWCIAIGS
IIATALVGGV TSASILAFGP VANEIGLRKS LHPYRRAVLV DCFAMTLAAI IPFLSAFIFI
VSAIISSLQK EYPFIQPVNP IDLSLAAFYP LTLFVVMSFS IIVGWGRSFE SKDGSLVKSL
PLN