| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0533 |
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| Symbol | |
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| ID | 5386765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 631523 |
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| End bp | 632884 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640863504 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001399526 |
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| Protein GI | 153948445 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGGCG GTAACTTTTC TGTGCCACCG AATCCGATCG TGGCCGAATT AGCCCAACCG
CCGACCATAA AAAGTGATCA TGCTTATTCA TTGCCAGAAT TGATTGATAT CGCCCAACGT
CAGAATCCGG ATACCCGCAT TGCCTGGCAG CAAGCGCGAC AGGCAGCCCT TGCGGTAGGA
ATGGGGGAGG CGATATTTTT ACCGATCATT TCTGCCAGTG TCATTGGTGG CTACCAGCGT
ACGACCACAC CTCTGCCTTA TGCTATCGGC AACGAAAAGG ATCTGAAAAC AACCGGGAGC
GCGGTTGTTC CTGCTTTGGC CTTACAGTGG CTTATCTTTG ATTTCGGCCA GCGCAGCGCG
TTGCTTGACG CCGCTAAACA GACGTCTTAT GCCGCTAATG TGACCTTCAA TGGCATGCAC
CAGAAACTGA TCTACGATGT GACACGCACT TACTTCCAAT ATGGTGCAGC ACAAGCCCAG
AGCCAGATAG CAAAACAAAC GTTGCAAAAC AGTCTAAAGA TTCAGGATGC TGCCGAGGAG
CGCCAGAAAA AGGGTATTGC GACAACGGTT GAAGTGGCGT TGGCACGCCA GCAAGTCGCA
CAGTCTCAGT TGCGTCGTGT GGTGGCAAAA GGTACTGAAC GTGATGCTTA TCAGGCATTA
TTAGGGGCGA TGGGCGTTTC TCCATCATTG GATATCAAAG CCGCCTATAC CGAAGATCGT
GCTTTACCAG ATGGGATAAG CGCCCCGACA GAAAAGATGA TCCAGTTGGC CCTCTCCCAG
CGGCCAGATG TTTTAGCCAG CTATGCGGCG GTCGAGGCAG CCAAGGCGGG TATCAAAGCC
ACTGAAGCCG ATTTCTTGCC AAAAGTCTAT CTGGCCGGGG CTGTTGCTGG TGGTGATGGG
CATTTTGATA TTCAGGGCCT ACCAGGTATC AGCCCGCAAA CTTCATCCTC TAGCATTTTA
GTCGGTGTCA GTGTTCCTCT GTACGATGGC GGGATACGCG CAGCCAGAGT TAAAGAGGCA
GAATCCCGCG CGGCTGTTGC TGCTGAAGGA TTTAAGAAAA CGCAGGAATT GGCGGTGCGC
GAAATTGTGG TAGCAGCAGA TACATTGCGC TCTGCGCTCG AATCCAATCA GGCGGCATTA
AATCTCGTGA AGACCTCGTT TATCTCCTAT GATGCGGCGC TGGAGTCTTA TCGCAGTGGT
GTTGGCACCA TAACGGTCGC CAATGAGGCG GCAAATGGTT TGTTGAATGC TCAACAAATG
AGTACTGATG CACATGCCGC CTCTTTGGTC GCCGCCGCCA ATCTGGCTTT CGTCATGGGT
AAAATGACCA ACACCTCACC GCCTTTGGAG CTGCTTCATT AA
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| Protein sequence | MGGGNFSVPP NPIVAELAQP PTIKSDHAYS LPELIDIAQR QNPDTRIAWQ QARQAALAVG
MGEAIFLPII SASVIGGYQR TTTPLPYAIG NEKDLKTTGS AVVPALALQW LIFDFGQRSA
LLDAAKQTSY AANVTFNGMH QKLIYDVTRT YFQYGAAQAQ SQIAKQTLQN SLKIQDAAEE
RQKKGIATTV EVALARQQVA QSQLRRVVAK GTERDAYQAL LGAMGVSPSL DIKAAYTEDR
ALPDGISAPT EKMIQLALSQ RPDVLASYAA VEAAKAGIKA TEADFLPKVY LAGAVAGGDG
HFDIQGLPGI SPQTSSSSIL VGVSVPLYDG GIRAARVKEA ESRAAVAAEG FKKTQELAVR
EIVVAADTLR SALESNQAAL NLVKTSFISY DAALESYRSG VGTITVANEA ANGLLNAQQM
STDAHAASLV AAANLAFVMG KMTNTSPPLE LLH
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