Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0525 |
Symbol | |
ID | 5386696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 619993 |
End bp | 621108 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640863496 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_001399518 |
Protein GI | 153950214 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.143614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGAG TGATGTTACA TAACGTCAAT AAAATATATC CAAACGGCAT GCAGGTTCTG CATGATATTA ATCTGGATAT TAAAGACGGT GAATTCATGG TGATCGTTGG CCCCTCTGGC TGCGCAAAAT CAACAATGTT GCGCATGATT GCTGGCCTTG AAGAAATATC CAGCGGTGAG CTCACTATCG CGGACAGAAA ATGTAATGAC GTGCAGCCTA AAGATCGCGG CATTGCCATG GTATTTCAAA ACTATGCCCT CTATCCGCAT ATGACCGTGT ACGAAAATAT GGCGTTTGGC CTGAAGGTGG CGAAGAAGAC CAAAGCTGAA ATCGCTCAGC GAGTCAATGA GGCCGCCGAG TTACTGGAAA TCACGGATCT GCTGCAGCGC AAGCCGAAAG AGATGTCAGG CGGCCAGTGC CAACGTGTGG CGTTAGGTCG GGCCATGGTC AGAAAACCTG CGGTATTTTT ATTCGATGAA CCCCTGTCCA ACCTAGATGC CAAGCTGCGC GTCTCCATGC GCCTGCGTAT CAGTAAGTTG CATCAACAAC TACGCGAATC GGGTAGACCG GCCACGATGA TTTACGTCAC TCACGATCAG GTTGAGGCGA TGACCATGGG TGAACGCGTC TGTATCCTGC GCAAGGGGAA GATCATGCAG GTTGACCGGC CAATGAACGT CTATCGCCAT CCGCTCAATA AATTTGTTGC GGAGTTTGTG GGGTCGCCAG CCATGAACAT GTTTAGCGGT CGCATAGAGG AATACCAAGA GCAATTGGTT ATTCGTTGTG GCGAATATCG CTTTCCACTG CCAGCGGATA AAGTCGCTAA GAGTCGGTCT TATCTGGGCC GGGAGATCGA TTTTGGGATC AGGCCTGAGG ATATCAGCAT CAGTCGCGCA GACGCAGCCA ATGCGCTAAC TGCCACGGTT ATCAGAGTCG ATGCGATGGG TTCCGATGAG TTTATCTACT TTAACTTGAT GGGGCAGCAG GCTATCTGTA AACGGCCTAA TCCTGAAGAT GAAATCCAAA TCAATGAGAC CTGCCATTTC TCTTTTAATC TGGATAAGTG CCATCTTTTC GATAAAGAAA GCGAAAAAAA TATTCTCTAT ATCTAA
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Protein sequence | MTGVMLHNVN KIYPNGMQVL HDINLDIKDG EFMVIVGPSG CAKSTMLRMI AGLEEISSGE LTIADRKCND VQPKDRGIAM VFQNYALYPH MTVYENMAFG LKVAKKTKAE IAQRVNEAAE LLEITDLLQR KPKEMSGGQC QRVALGRAMV RKPAVFLFDE PLSNLDAKLR VSMRLRISKL HQQLRESGRP ATMIYVTHDQ VEAMTMGERV CILRKGKIMQ VDRPMNVYRH PLNKFVAEFV GSPAMNMFSG RIEEYQEQLV IRCGEYRFPL PADKVAKSRS YLGREIDFGI RPEDISISRA DAANALTATV IRVDAMGSDE FIYFNLMGQQ AICKRPNPED EIQINETCHF SFNLDKCHLF DKESEKNILY I
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