| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0522 |
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| Symbol | |
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| ID | 5386900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 614846 |
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| End bp | 617131 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640863493 |
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| Product | putative autotransporter protein |
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| Protein accession | YP_001399515 |
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| Protein GI | 153949469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0404078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACC ATAAGATCTG GCGTTTATCC GCCGTTGCTG TTGCTTTACT GATTAGCGGT
AATGGCTATG CCGATCAGAC CTTCCACTTC GCTCAGCAAC CGCATAACAC GGGCGATCAT
ACTGTGATCG CCGCACCAGA GGTCAATAAC TTTTCATTGG CAGATCTGAC CGCCAACGCA
GAAGGGCAAG CAGTGGATGC GACCAACGCA GGCGCACTGT CGCTGCGGGT TGAACCCACT
CAAGGTGACG CTCAGGCGAA TGGCGTACTG GTCACCTCCG GCACCTTTAC TAATCAGGCT
CAGGGCTCGA TCACCGTGAG TGCCAGCAGT CAGGATCAAC ATGCTGTTGC CAGCGGGTTG
CAGGCAACGG ATGCCTATTG GTCCACTCTG CGTAATCAGG GTAGCATCCG TGCCACGAGC
AACAGCCTAC ACGGCAGTGC CGAAGCCTAT GGTATCCAGG CTGGCCTGGC CTTTTCCGAT
GCCGCCGGGG ATCACTACGG TGACCATATG ATGCTGAGCA ACGAGGGTGT GATGCAGGTG
AGTGCCACGG CCGAGCAGGA CGCCTTTGCC AGCGGTATCT ATACCAATGC CGGTAATGGC
GTGGTCAACA ATGGCCGTCT GGATGTCAGT GCTCATGCCA GTGCTGGCGA TGCGCGGGCA
ACCGGCCTGC ATACCCTCTC TGCCAACCCA GGCGTCGATC CCGATCCATG GAACCCCGCT
AACCCCACTC ATCTGATGAG CAACAATGGC TCGTTGTCAG TCACGGCCAG CGGTAACAAT
GCGACCGCAA GCGCGATCAG TACCGAGGGC GAAGGGGTCT ACATCTACAA CAACGGGACA
CTGATCGTTG ATGCATTTAG CGAGAGTGCG CAGGGCAGTG CATCCGCCTA TGGTATTCAT
GTGCTCAACG GCAGTGCCAC GATCAACTCC AGCGGCAGAA TTTTGGCGAC AGCCACCGGC
GGAAGCCAAC AGCAAGCCTA TGAAGTGATG GCCGACGGTT CGGTAGTTAA TATTGAACGC
TATACACTCG CCTTGAGCAA TGAGACACCG TGGGCGGTCA GTAATGGCGG TTCGATCGTG
CTGGGTAACG GTACGCAAGG GGCCGATCTG GTGCTAATGG CTGGGCAGGC CAGTGAAGGT
TTCGCCTATG GTAAAGAGTA CAGCTTGGAC AATCTGGCTT ACGATACCAC CTCCGGCCAG
CAGAGTACGG TGGGAGGTTC TATTGCGGGG TTGTACGGTA TTACGCCTGA TATCAAGGTG
ATTCACAGCG GTAGCAGCAG TAGTTCGTTG GGATCTGCTG CATTGGTGTA TGCACCAGAT
GTCTCTCATG CCGGAGTCTC CGCATTGGCA CAGCGTTCTT CCATGGAGCA GGCATCCAAT
ATCATCTCCT CGCAACTGCA TAGTCAGCTG GTAAGTAACG CCGGTTGTAA CCAGAAGTTG
GAGAGTGCCG ATAGCTGCGT CTTTATCACA CCTTATGCTG GTGAGTACCG TCGCGATCCA
GTGACCTCCG GTTACAGCGG TCAGCGCTAT GGGGTACTGC TCGGTCAGAA CCAACATTTT
GGCGATTTCC AGCTTGGCTG GCACGGCGGT TATGAGAGTG CCAGCACCGA TTTTAATGGT
ACCTCTGTAG GGCGTAAGGA AGAGATCAAT ACGCTGATGC TGGGGGTTCA GGGCGGAATG
AAGCTCTCTG AGAGTCTGTT TATTGCAGCG ACCAGTACGT GGTTCAGCAG TGACACCGAT
TACAGTGACA GCAATACCTA CTACGGCGTG GGTAGCCAGA GCGGCAGCTA TGATAGCAGT
GGCCTCTACA CTGATGTCTC CGTGGGTAAT AGCTGGCAGT TGAATCGCAA CTATGCCATG
ACACCGATGG TCGGGCTGAC GCATATCTGG CAGCAACGCG ATGGCTATAT TGTCTCATCC
AATAACAGCA ACTATGATCT TATCGACACC CGCTATAGCA GCTACAGCGA CCATGCAGTC
GCTCTCCATG CTGGAGTACG TCTCGATGGT CGCTATCCAC TGACCAACGA GACACTACTT
AAGCCGTTCT TTAATGTCGG ATTACAGCAA ATGTTGTATG GCGATGAGAT CACCATCGAT
CAGAGTATCC CTAATTCGCC GGTAGTTGGC GTAAGCACCA AGGATAAAAC CACTCAAGGA
ACCTTCGATC TGGGGATGGC ACTGGTAAGC GATAACGGTG TGTCTGCCAG CCTACAGCTA
TCGGGCATGG TCAATAGTGA TCGTCAGGAT TTCACCGGCT GGGCAAATCT GGGCTGGGCG
TTCTAG
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| Protein sequence | MNNHKIWRLS AVAVALLISG NGYADQTFHF AQQPHNTGDH TVIAAPEVNN FSLADLTANA
EGQAVDATNA GALSLRVEPT QGDAQANGVL VTSGTFTNQA QGSITVSASS QDQHAVASGL
QATDAYWSTL RNQGSIRATS NSLHGSAEAY GIQAGLAFSD AAGDHYGDHM MLSNEGVMQV
SATAEQDAFA SGIYTNAGNG VVNNGRLDVS AHASAGDARA TGLHTLSANP GVDPDPWNPA
NPTHLMSNNG SLSVTASGNN ATASAISTEG EGVYIYNNGT LIVDAFSESA QGSASAYGIH
VLNGSATINS SGRILATATG GSQQQAYEVM ADGSVVNIER YTLALSNETP WAVSNGGSIV
LGNGTQGADL VLMAGQASEG FAYGKEYSLD NLAYDTTSGQ QSTVGGSIAG LYGITPDIKV
IHSGSSSSSL GSAALVYAPD VSHAGVSALA QRSSMEQASN IISSQLHSQL VSNAGCNQKL
ESADSCVFIT PYAGEYRRDP VTSGYSGQRY GVLLGQNQHF GDFQLGWHGG YESASTDFNG
TSVGRKEEIN TLMLGVQGGM KLSESLFIAA TSTWFSSDTD YSDSNTYYGV GSQSGSYDSS
GLYTDVSVGN SWQLNRNYAM TPMVGLTHIW QQRDGYIVSS NNSNYDLIDT RYSSYSDHAV
ALHAGVRLDG RYPLTNETLL KPFFNVGLQQ MLYGDEITID QSIPNSPVVG VSTKDKTTQG
TFDLGMALVS DNGVSASLQL SGMVNSDRQD FTGWANLGWA F
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