| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0509 |
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| Symbol | |
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| ID | 5386896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 590769 |
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| End bp | 592457 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640863480 |
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| Product | ShlB/FhaC/HecB family haemolysin secretion/activation protein |
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| Protein accession | YP_001399502 |
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| Protein GI | 153948806 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGTT TTTATTATTC TATATTAGTA GCTGGCGTAT TATTGAAAAT AGTGGCTATT
CCAGATGCCA GTTATGGCGC GGAATTAGCG CCCGTTCAAC AAAGTATTCA CCAACAGGAG
CGGCAACGGG CACTTGAAGA GCGCCTGGCT CCGCCGACGC CGGATGTGCG CTTATCTGCG
CCCTCGGCCT TTTTTAGCCG TATTATTTTT CCGCTGGAGA CACCCTGCTT TGTTATTAAT
CGTATAAAAA TCAGTGGGGC CGAGCCATTA CCCCGTTGGT TGCCGTTGCA ACGCATTGCC
GATCAAGCGC AAGGCCAGTG TCTGGGGGCC AAGGGCATTA ACCTACTAAT GAGCCAGATG
CAAAACCGTT TGGTCGATCA CGGCTATGTG ACTACCCGTG TGCTGGCCCC GCAGCAGGAT
TTAAACAGCG GCACGCTGGC GCTAAACGTC GTGCCCGGCA AAATACGCGC TGTGGAACTG
ACGCCAGACA GTAATAGGTA TGTCACGTTA TTCAGCGCTT TTCCTGCCCG TGCCGGGACG
CTGTTGGATT TACGCGATAT CGAACAAGGC TTAGAAAATC TACAGCGTGT TCCCACGGTG
CAAGCCAATA TGGCGTTGAT CCCAGGCTCT GCCCCCGGTG AGACGGATAT CATTCTGAAC
TGGCAACAGC GAAAAATGTG GCGGCTGGCA GCCTCACTGG ATGATTCGGG TACCCGCAGC
ACTGGCCGCT ATCAAGGGGG GGCGACGTTG TTTCTGGATA ACCCGCTTTC TCTGAGTGAT
CTTTTTTATG TCTCAGTTGG TGGCGCACTG CAACGCCGTG GCGATAAAGG CACGAATAAT
CTGACCGGCC ATTACTCATT GCCATTCGGT TATTGGACCG CAGGCATGAC CGCCAGCCGT
TATGACTATT ACCAGGCCGT CGCGGGCCTG AATGGCGATA TCAACTACCG AGGTGAAAGT
GAGAACGTGG CGCTCCAACT CAGCCGGTTG TTGCACCGTA ATGCCAGCCA GAAAACCACC
TTTACCTACG ATGTGCTAAC CCGCTCGTCG AAAAACTATA TCAACGATAC CGAAGTGGAA
GTGCAGCGCC GCCGCACCTC GGCCTGGCGG ATCGGGCTAC AACACCGCCA CTTTATCTCG
CAGGCGATTT TGGATGCCGG TATCAGCTAT CAGCGTGGCA CCCGCTGGTT TGGTGCCATA
CCCGCGCAGG AAGAGTATTT CGGCGAAGCC ACCGCCCTGA GCAAAATTCT GCGATTGAAT
GCGCAACTGG ATATTCCTTT TGTGGTTATG GCGCAAAACC TCCATTACAA CCTGCAATAT
CAGCGCCAAA GTACCAACAC GCCACTGACG CCGCAGGATC AGTTCTCCAT TGGTGGCCGC
TGGTCGGTGC GTGGTTTTAA TGGTGAGCGC ACGCTGATTG CCGATCGCGG CTGGTGGGTG
CGCAATGATA TCGGCTGGTA TCTGCCGCTA CCGGGGCATG AGCTGTATGT CGGTGTGGAT
TACGGCGAAG TCGGTGGTCG TAGTGGCGCT TATCTGTTGG GCCGCCATTT GGCGGGCAGT
GCCGTCGGGG TACGTGGCAA CGTACTGAAT ACCCGCTATG ACCTGTTTGC GGGGAAACCG
CTCTCTAAAC CTAATGGTTT CAAAACCGAT TCGCTGGCGG TGGGCTTTAA CCTGAATTGG
CTGTACTGA
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| Protein sequence | MSRFYYSILV AGVLLKIVAI PDASYGAELA PVQQSIHQQE RQRALEERLA PPTPDVRLSA
PSAFFSRIIF PLETPCFVIN RIKISGAEPL PRWLPLQRIA DQAQGQCLGA KGINLLMSQM
QNRLVDHGYV TTRVLAPQQD LNSGTLALNV VPGKIRAVEL TPDSNRYVTL FSAFPARAGT
LLDLRDIEQG LENLQRVPTV QANMALIPGS APGETDIILN WQQRKMWRLA ASLDDSGTRS
TGRYQGGATL FLDNPLSLSD LFYVSVGGAL QRRGDKGTNN LTGHYSLPFG YWTAGMTASR
YDYYQAVAGL NGDINYRGES ENVALQLSRL LHRNASQKTT FTYDVLTRSS KNYINDTEVE
VQRRRTSAWR IGLQHRHFIS QAILDAGISY QRGTRWFGAI PAQEEYFGEA TALSKILRLN
AQLDIPFVVM AQNLHYNLQY QRQSTNTPLT PQDQFSIGGR WSVRGFNGER TLIADRGWWV
RNDIGWYLPL PGHELYVGVD YGEVGGRSGA YLLGRHLAGS AVGVRGNVLN TRYDLFAGKP
LSKPNGFKTD SLAVGFNLNW LY
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