Gene YpsIP31758_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0493 
SymboluxaA 
ID5386566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp568988 
End bp570478 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content50% 
IMG OID640863464 
Productaltronate dehydratase 
Protein accessionYP_001399486 
Protein GI153948564 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATA TTATAAAGAT TCACCCGCTG GATAATGTGG CCGTTGCCCT GCAAGATCTG 
GCTGCAGATG AGCGGATCGA GAGCGGTGAG TTTAGCGTCA AACTGGCTCA GCCCGTGGTT
CGTGGGCATA AATTCGCGTT AACCGCTATC GAACCGGGGC AGATGATCGT CAAGTATGGT
TTGCCTATAG GCCATGCATT GACCTTGATC CAACCAGGCG AACATATTCA TTCACAGAAC
GCCAAAACTA ATCTGAGCGA TTTGGATGAG TATGAATATC AGCCAGAGTT CAGTTCTCTA
CCGCCACAAA TGGCTGATCG TGACGTGCAA ATTTATCGTC GGCCAAAGGG TGAAGTGGGG
ATCCGTAATG AACTGTGGAT CATACCAACG GTTGGTTGCG TTAATGGGAT CGCCCGTCAG
ATCCAGCAAC GTTTCCTGAA AGAGACACAG GATGCTGAAG GGATTGATGG TGTTTACCTG
TTCAGCCATC CATTTGGCTG CTCGCAACTG GGGCAGGATC ATGAAAATAC CCGCACTATG
CTACAAAACA TGGTGCGTCA CCCGAATGCG GGGGCGGTAC TGGTCATTGG CTTAGGCTGT
GAAAACAATC AGGTAGATGT TTTCCAAACG ACATTGGGCA AGGTTGACGA AGAGCGCGTG
CGCTTTATGG TTTGCCAGCA GCATGATGAT GAGGTTGAAG CCGGTTTAGA GCATTTACAT
GCTCTGTATC AGGTCATGCG TCATGATCGC CGGGAACCCG GCCAGTTAAG TGAACTGAAA
TTTGGCCTGG AATGTGGGGG GTCTGATGGG CTGTCCGGTA TTACGGCCAA CCCATTACTG
GGACGTTTCT CTGACTATGT GATTGCCAAC GGCGGAACAT CGGTACTAAC CGAAGTGCCG
GAAATGTTTG GCGCAGAACG TATTCTGATG AGCCGCTGCC GTGATGAAGC CACGTTTGAA
AAAACGGTCA GCATGGTCAA TGACTTCAAA CAGTACTTTA TTGCGCACGA CCAACCGATT
TATGAAAACC CATCACCGGG TAATAAAGCG GGGGGGATCA CCACGCTGGA AGAAAAATCT
CTCGGTTGTA CGCAAAAAGC GGGTCAGAGC CAAGTGGTTG ATGTGCTGAA GTATGGTGAG
CGCTTACAGC GCCCAGGACT GAATTTACTC AGTGCGCCGG GCAATGATGC GGTTGCGACC
AGCGCATTAG CAGGTGCGGG CTGCCATATG GTGCTGTTCA GTACTGGCCG TGGCACACCA
TACGGAGGTT TTGTACCAAC AGTGAAACTG GCAACTAACA GTGAACTGGC GGCGAAAAAG
CCACATTGGA TCGATTTTGA TGCGGGTAAG CTGATCCATG GCACCTCAAT GGATACCTTG
CTGAACGAGT TTGTTGATCT GATTGTTGAG ATTGCTAATG GTAAACCTGC CCGTAATGAA
GTGAATGACT TCCGTGAATT AGCCATTTTT AAGAGCGGTG TAACCTTGTA A
 
Protein sequence
MQNIIKIHPL DNVAVALQDL AADERIESGE FSVKLAQPVV RGHKFALTAI EPGQMIVKYG 
LPIGHALTLI QPGEHIHSQN AKTNLSDLDE YEYQPEFSSL PPQMADRDVQ IYRRPKGEVG
IRNELWIIPT VGCVNGIARQ IQQRFLKETQ DAEGIDGVYL FSHPFGCSQL GQDHENTRTM
LQNMVRHPNA GAVLVIGLGC ENNQVDVFQT TLGKVDEERV RFMVCQQHDD EVEAGLEHLH
ALYQVMRHDR REPGQLSELK FGLECGGSDG LSGITANPLL GRFSDYVIAN GGTSVLTEVP
EMFGAERILM SRCRDEATFE KTVSMVNDFK QYFIAHDQPI YENPSPGNKA GGITTLEEKS
LGCTQKAGQS QVVDVLKYGE RLQRPGLNLL SAPGNDAVAT SALAGAGCHM VLFSTGRGTP
YGGFVPTVKL ATNSELAAKK PHWIDFDAGK LIHGTSMDTL LNEFVDLIVE IANGKPARNE
VNDFRELAIF KSGVTL