Gene YpsIP31758_0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0491 
SymboluxaC 
ID5384915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp565918 
End bp567327 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content51% 
IMG OID640863462 
Productglucuronate isomerase 
Protein accessionYP_001399484 
Protein GI153949672 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1904] Glucuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00170944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGT TTTTGACCGA AGACTTTTTG CTGGACACCG AGTTCGCCCG TCGTCTCTAC 
CATGACTATG CAAAAGATCA GCCGATCTTT GATTATCACT GCCATTTGCC GCCAGAACAG
ATCGCCGAAA ACTACCGTTT TAAGAACATG TATGACATCT GGTTGAAAGG TGACCACTAT
AAATGGCGAG CCATGCGGAC CAACGGTGTT GCTGAGCGTC TGTGCACCGG CGATGCCAGT
GATCGTGAGA AGTTCGATGC TTGGGCTGCG ACGGTTCCTC ACACTATCGG TAACCCGTTG
TACCATTGGA CGCATCTTGA ATTGCGCCGT CCGTTTGGTA TTACCGGTAA GTTATTGTCC
CCGGCGACAT CTGAAGAGAT CTGGCAACGC GGCAACGAAT TATTGGCGCA GGACCCCTTC
TCTGCGCGCG GCATTATGCA GCAGATGAAT GTCAAAATGG TTGGGACCAC TGACGACCCA
ATTGATGATC TGCGCCACCA CAAAGCGATT GCCGCTGATG GCAGCTTCAA CATCAAAGTG
TTACCAAGCT GGCGTCCCGA CAAAGCGTTT AATATTGAAG CAGCGGGTTT TAACGATTAT
ATGCAGCGGC TTGAAGCGGC TGCGGATACC TCAATCAGCC GTTTTGCCGA TCTGTGCGTG
GCATTGAATA AGCGTATGGA CCACTTTGCC GCCCACGGTT GTAAAGTCTC TGACCATGCG
TTGGATGTGG TGGTATACGG CGAGGCGGAT GAAACCACAC TGGATGCTAT TTTGGCACGC
CGTCTGGCTG GCAATCAGCC AAGTACAGAA GAAATTGCGC AGTTTAAAAC CGCAGTATTA
CTGTTCTTGT CTGGTGAATA TCATCGTCGT GAATGGGTAC AGCAGTATCA CATTGGTGCG
CTACGTAATA ATAACAGCCG CATGTTTAAC CTGGTGGGGC CGGATATCGG CTTTGACTCC
ATCAATGACC AACCGCTGGC GCAGCCGCTG TCTCGGCTGT TAGATGCACA GGGTCTGCGC
AATGCCCTGC CAAAAACAAT CCTTTACTGC CTGAATCCGC GTGATAACGA AGTGATCGGT
ACCATGGTCG GCAACTTCCA GGGCGAAGGT GAAGCAGGAA AAATGCAGTT TGGTTCCGGC
TGGTGGTTTA ACGACCAAAA AGACGGTATG CAGCGCCAGA TGACCCAACT TGCTCAGCTT
GGTCTATTGA GCCGCTTTGT TGGAATGCTC ACTGATAGCC GTAGTTTCTT GTCTTATACC
CGCCATGAGT ATTTCCGTCG CATTCTTTGC CAGATGATTG GCCGCTGGGT CGCGGACGGT
GAAGCACCGG CCGATATTGC GTTACTGGGG GCGATGGTGA AAAACATTTG CTTCGATAAT
GCGCAGCAAT ATTTCGCCAT CGAACTGTAA
 
Protein sequence
MSQFLTEDFL LDTEFARRLY HDYAKDQPIF DYHCHLPPEQ IAENYRFKNM YDIWLKGDHY 
KWRAMRTNGV AERLCTGDAS DREKFDAWAA TVPHTIGNPL YHWTHLELRR PFGITGKLLS
PATSEEIWQR GNELLAQDPF SARGIMQQMN VKMVGTTDDP IDDLRHHKAI AADGSFNIKV
LPSWRPDKAF NIEAAGFNDY MQRLEAAADT SISRFADLCV ALNKRMDHFA AHGCKVSDHA
LDVVVYGEAD ETTLDAILAR RLAGNQPSTE EIAQFKTAVL LFLSGEYHRR EWVQQYHIGA
LRNNNSRMFN LVGPDIGFDS INDQPLAQPL SRLLDAQGLR NALPKTILYC LNPRDNEVIG
TMVGNFQGEG EAGKMQFGSG WWFNDQKDGM QRQMTQLAQL GLLSRFVGML TDSRSFLSYT
RHEYFRRILC QMIGRWVADG EAPADIALLG AMVKNICFDN AQQYFAIEL