Gene YpsIP31758_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0470 
SymbolelbB 
ID5384395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp548148 
End bp548801 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID640863440 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_001399463 
Protein GI153950148 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG TTGGCGTAGT GCTCAGTGGA TGTGGTGTTT TGGATGGCGC TGAAATCCAT 
GAGTCTGTCT TAACAATGCT GGCATTGGAT CGCGCGGGCG CAGAGGTTTT GTTTTTTGCG
CCAGATAAAC CTCAACTTCA TGTTATTAAT CATATTACTG GTGAGATTGT TGCAGAAGAA
CGGAACGTTT TAGTGGAGTC TGCCCGCATT GCCCGTGGCC TGATCACCCC CCTTTCTGCG
GCTGATCCAG AGGTATTAGA TGCACTAATC GTACCGGGAG GTTTTGGGGC AGCAAAGAAC
CTCTGCGACT TCGCCATTAA AGGGGTCGAA TGTTCCGTTG AACCCGATTT ATATAAGTTA
ATTCAATTAA TGCATAAGTC CGGTAAACCA ATTGGATTGA TGTGTATTTC TCCGGTGATG
CTGCCGAAGC TGCTGGGCAA ACCCATTCGA CTGACAATTG GTAACGATCC CGATACGATT
GATGCCATTG AAATTATGGG GGGGGAGCAT GTTATTTGCC CTGCTGATGA CGTTGTCATT
GATTTGGAAA ATAAAGTGGT GACGACACCG GCTTACATGT TGGCTGGTTC CATTTCAGAA
GCGGCTAAAG GTATTGATAA ATTAGTGACG AAAGTCTTGG ATTTAACTGA ATGA
 
Protein sequence
MKTVGVVLSG CGVLDGAEIH ESVLTMLALD RAGAEVLFFA PDKPQLHVIN HITGEIVAEE 
RNVLVESARI ARGLITPLSA ADPEVLDALI VPGGFGAAKN LCDFAIKGVE CSVEPDLYKL
IQLMHKSGKP IGLMCISPVM LPKLLGKPIR LTIGNDPDTI DAIEIMGGEH VICPADDVVI
DLENKVVTTP AYMLAGSISE AAKGIDKLVT KVLDLTE