Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0447 |
Symbol | |
ID | 5386648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 522565 |
End bp | 523539 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640863416 |
Product | putative calcium/sodium:proton antiporter |
Protein accession | YP_001399440 |
Protein GI | 153947802 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0530] Ca2+/Na+ antiporter |
TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein [TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.597372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCTTG CGATAACACT ATTAATCATT GGCTTGGTTT TATTAGTGTA TGGCGCTGAT CGATTAGTTT ACGGTGCCGC AGTGTTATCC CGTTCTTTTG GGGTCCCCCC TCTCATTATC GGGATGACCA TCGTCGGTAT TGGTACATCG CTACCGGAAC TCATTGTTTC AGTTACAGCG GCATTGAATG GCCAAACGGA TATGGCGGTG GGTAATGTGC TCGGCTCCAA TATTACCAAC CTATTGCTGA TTGTAGGAGG GGCGGCACTT ATTCGCCCGC TGATTGTACG CTCAGAGATT CTGCGGCGGG AGTTGCCACT GATGCTCGTG GTCACGGCGT TATGTGGTTT TCTGCTGGCA GATAACCACC TCAGCCGCGG AGATGGTGTC ATCTTGCTCT TGGCTGCTGC CGCTTTTATT GTTCTGATGC TCAAAATCGC ACGCCTGGCT CATGCGGAAG GGAATGATAT CTTAACCCGT GAACAACTAT CTGAATTACC ACAAGATAGT AGCACTACCG TGGCGTTGTT GTGGCTCGTA TTAGCCTTCA TTATTTTACC GCTCTCCGCC AAGATGATTA TCGATAATGC GACGGTCATT GCCCGGGTGG CCGGTGTCAG CGAGTTGGTC ATTGGGCTGA CAGTGATCGC TATCGGCACC AGTTTGCCTG AACTGGCTAC CTTCATCGCC GGTGCGTTGA AAGGTGAAAA TGATATCGCT GTCGGTAATA TCATCGGCTC CAACATTTTT AATATTGTGA TTGTACTCGG TGTGCCAGCC CTGCTGTCGC CCGGTGAGAT CAATCCCGAG GCTTTCCAGC GTGATTATTG GGTGATGCTC GCGGTCAGTG TGGTGTTCAC CCTTCTTTGC CTGGGCCGTA AACATCGAAT CGGTCATCTG GCAGGCGCTC TGTTATTATG TGGGTTTATC ACTTATCTTG CGGTGTTGTT TTTTGCTCCC ATAAGTGCGC TGTAA
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Protein sequence | MFLAITLLII GLVLLVYGAD RLVYGAAVLS RSFGVPPLII GMTIVGIGTS LPELIVSVTA ALNGQTDMAV GNVLGSNITN LLLIVGGAAL IRPLIVRSEI LRRELPLMLV VTALCGFLLA DNHLSRGDGV ILLLAAAAFI VLMLKIARLA HAEGNDILTR EQLSELPQDS STTVALLWLV LAFIILPLSA KMIIDNATVI ARVAGVSELV IGLTVIAIGT SLPELATFIA GALKGENDIA VGNIIGSNIF NIVIVLGVPA LLSPGEINPE AFQRDYWVML AVSVVFTLLC LGRKHRIGHL AGALLLCGFI TYLAVLFFAP ISAL
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