| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0432 |
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| Symbol | treR |
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| ID | 5385150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 510604 |
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| End bp | 511557 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640863401 |
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| Product | trehalose repressor |
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| Protein accession | YP_001399425 |
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| Protein GI | 153949560 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02405] trehalose operon repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACC GTTTGACCAT TAAAGATATT GCCCGCATGA GTGGTGTTGG AAAATCCACA
GTTTCACGGG TATTAAATAA TGAAGGCAGC GTCAGCCCAC AGACCCGTGA ACGGGTCGAG
GCGGTGATCC GCCAGCACGG TTTTACCCCC TCCAAATCGG CCCGAGCCAT GCGTGGGCAA
AGCGACAAAG TTGTTGGCAT CATTGTCTCT CGTCTCGATT CGCCATCCGA GAACCAGGCA
GTACGTACTA TGTTACCGCT GTTCTATCAA CAAGGTTACG ACCCGATCCT GATGGAGAGC
CAATTTGATA CCACATTGGT TAGCGAGCAT TTACATATTC TGCAACAACG CCATGTTGAT
GGCGTGATCC TGTTCGGTTT CAGCGGATTA ACTGCAGAAA TGCTGGCACC GTGGCAGGAA
AAAATGGTGG TGCTGGCGCG CGAGTACCGT GGTTTTTCTT CTGTCTGCTA TGACGATGAA
GGTGCCATAT ACCTCTTGAT GGACAAATTA CGCCAAGCCG GGCACCGCCA TATCAGTTAT
ATCGGCGTAC AATCTTCCGA TGCAACCACC GGTATGCGCC GCTATCAAGC CTATCTCGAT
TACAGTCAAC AGCATGGCCT GACACCAATG GTGGCGCTGG GGGAGTTGAG CTATCAGAGT
GGCTTTCAGC TCGCTCCTCA GGTGATAACC CCACAAACCT CGGCATTGGT TTGTGCCTCT
GACACTATCG CCATGGGCGT CAGTAAATAC TTGCAACAGC AGGAGCGGGA GCAGCCCCCC
ATTCAGGTAT GCGGTATTGG TAATACACCG CTGTTACACT TTTTGTTTCC CGATACCTTA
ACCATTGAGC TGGGTTATGG CCGTGCAGGT GTGAAAGCCG CGCAGCAATT ACTGGACCAA
CTGAGTAATA GCCAACCTAT TCAGCAAATT ATTATTCCGG GCCAACTCGT CTGA
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| Protein sequence | MQNRLTIKDI ARMSGVGKST VSRVLNNEGS VSPQTRERVE AVIRQHGFTP SKSARAMRGQ
SDKVVGIIVS RLDSPSENQA VRTMLPLFYQ QGYDPILMES QFDTTLVSEH LHILQQRHVD
GVILFGFSGL TAEMLAPWQE KMVVLAREYR GFSSVCYDDE GAIYLLMDKL RQAGHRHISY
IGVQSSDATT GMRRYQAYLD YSQQHGLTPM VALGELSYQS GFQLAPQVIT PQTSALVCAS
DTIAMGVSKY LQQQEREQPP IQVCGIGNTP LLHFLFPDTL TIELGYGRAG VKAAQQLLDQ
LSNSQPIQQI IIPGQLV
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