| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0430 |
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| Symbol | treC |
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| ID | 5385478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 507000 |
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| End bp | 508667 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640863399 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_001399423 |
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| Protein GI | 153950474 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATC CAATCCCTTG GTGGCAACAT GGTGTCATCT ATCAGATTTA CCCGAAGAGC
TTTCAGGACA GTACCGGTAA TGGCTATGGT GACCTGGCAG GCGTTGCGCA GCGGCTGGAT
TATCTGCAAA AGCTGGGCGT TGATGCCATT TGGCTGACAC CGGTGTATGT CTCGCCACAA
GTGGATAACG GTTATGACGT GGCGGATTAC TGCGCCATTG ACCCCGCTTA TGGCACATTG
GATGACTTTA AACGTTTGGT CGCGGGTGCT CATCAGCGAG GCATACGCAT CATCATGGAT
ATGGTGTTCA ATCACACCTC CACAGAACAT GCCTGGTTTA AAGCTTCGCA GGATCGTAAT
AGCCCTTATC GGCAATTTTA TATTTGGCGT GACGGTGACG GTGGAGACGG CAGTTTACCG
AATAACTGGC GCTCGAAATT CGGTGGTCAC GCATGGCAGT GGCACGCGGC CAGCGGCCAG
TATTATCTGC ATTTGTTTGC CCCAGAGCAG GCTGATCTGA ATTGGGAACA CCAACCGGTA
CGCGATGAGC TCAAAAAGGT GTGTGAATTT TGGGCCGATC TGGGGGTTGA TGGTCTGCGT
TTGGATGTCA TCAATCTGGT GTCCAAACAG CAGGATTTCC CTAATGATCT GGACGGCGAT
GGCCGCCGTT TTTATACCGA TGGCCCACGC ATTCATGAGT TTTTGCAGGA ACTGAGCCGC
GATGTGTTCC AGCCACGCCG CCTGATGACG GTAGGCGAGA TGTCATCCAC CCGTCTCGAG
CATTGTCAGC GATATGCGGC ATTAGGCGGT GATGAGTTAT CCATGACCTT TAATTTCCAT
CACCTGAAAG TGGATTATCT TAACGGTGAA AAGTGGTCAT TGATGCCGCC GAATCGGGTG
GAGTTGAAAC ACATTTTTAA TCAGTGGCAG CAAGGGATGC ACAACCGCGC ATGGAACGCA
CTATTTTGGT GTAATCACGA TCAACCACGC ATTGTCTCGC GTTTTGGTCA TGAAGGCGCA
CTACGTTTGC CAGCGGCAAA GATGCTGGCG ATGGTACTGC ACGGTATGCA GGGCACGCCT
TATATTTATC AGGGGGAAGA AATTGGCATG ACGAACCCCA ATTTCACTGA TATCACTCAA
TACCGTGATG TTGAAAGCCT GAATATGTTT GCCGAACTGA GTGTGGCAGG CCGCGAACCC
GATGAGTTAT TGGCGATTCT GGCAGCTAAA TCCCGTGATA ATAGCCGTAC CCCCATGCAA
TGGGATAGCA GCGATAATGC GGGTTTCAGC CAAGGCACTC CCTGGATTGC CCCTTGCAGC
AATTATCATG AGATTAACGT TAATGCCGCA TTGGCCGACG CTGACTCGGT GTTTTATGCC
TATCAATACC TGATAGCCCT GCGTAAACAA TACGATATTT TCACTTTCGG TGATTATCAG
GATCTTTGCC CACAGCATCC TGATTTATGG TGCTATTTGC GCAGTTGGCA AGGGAAGCAA
CTGTTGGTAG TCGCTAACCT GAGTGAAGAG CCCCAGCGAT GGCAACCCGA GGGCCTCACG
CTGGACGGTA ATTGGCAATT ATTGATGAGC AGCTACGACC AAAGCGCCTT CCAACCGCAA
GATATGATAT TACGCGGATA TGAGGGGATT TATTGGGTAT GTGAATAA
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| Protein sequence | MNNPIPWWQH GVIYQIYPKS FQDSTGNGYG DLAGVAQRLD YLQKLGVDAI WLTPVYVSPQ
VDNGYDVADY CAIDPAYGTL DDFKRLVAGA HQRGIRIIMD MVFNHTSTEH AWFKASQDRN
SPYRQFYIWR DGDGGDGSLP NNWRSKFGGH AWQWHAASGQ YYLHLFAPEQ ADLNWEHQPV
RDELKKVCEF WADLGVDGLR LDVINLVSKQ QDFPNDLDGD GRRFYTDGPR IHEFLQELSR
DVFQPRRLMT VGEMSSTRLE HCQRYAALGG DELSMTFNFH HLKVDYLNGE KWSLMPPNRV
ELKHIFNQWQ QGMHNRAWNA LFWCNHDQPR IVSRFGHEGA LRLPAAKMLA MVLHGMQGTP
YIYQGEEIGM TNPNFTDITQ YRDVESLNMF AELSVAGREP DELLAILAAK SRDNSRTPMQ
WDSSDNAGFS QGTPWIAPCS NYHEINVNAA LADADSVFYA YQYLIALRKQ YDIFTFGDYQ
DLCPQHPDLW CYLRSWQGKQ LLVVANLSEE PQRWQPEGLT LDGNWQLLMS SYDQSAFQPQ
DMILRGYEGI YWVCE
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