Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0405 |
Symbol | tldD |
ID | 5385037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 468536 |
End bp | 469981 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640863374 |
Product | protease TldD |
Protein accession | YP_001399398 |
Protein GI | 153950166 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCTCT CATTTGTCAG TGAGCAGTTA CTCACTGCTA ACAAGTTGAA CCATGAGGAC TTGTTCTCAG TGTTGGGGCA GCTAACTGAA CGCCGCCTCG ATTATGCTGA CCTGTATTTC CAGTCCAGCT ATCACGAGGC CTGGGTGTTG GAAGACAGCA TCATCAAAGA CGGCTCCTAC AATATTGATC AGGGTGTGGG CGTACGTGCG GTAAGTGGTG AAAAAACCGG TTTTGCCTAC GCTGATCAAA TCACGTTAAA TGCGTTGCAG CAAAGTGCCC ATGCGGCCCG CAGTATTGTT CGTGACACTG GCAACGGCAA AGTCCATACC TTGGGTGAGA TTGCTTATCA AGCCTTGTAC CCGTTGCTGG ACCCACTACA AAGCCTATCG CGGGAAGATA AAATTGCCTT GTTACATCGG GTCGATAAAG TCGCTCGCGC CGCCGATAAA CGGGTGCAGG AAGTTAGCGC CAGTCTGACC GGCGTGTATG AACAGATTCT GGTGGCTGCG ACTGACGGCA CCTTGGCCGC CGATGTGCGT CCGTTGGTCC GTCTTTCGGT CAGTGTACTG GTGGAAGATA ACGGTAAACG TGAACGCGGT GCTTGCGGTG GCGGTGGCCG TTTCGGTTAT GACTATTTCC TTGAAACCGT TGATGGCGAA GTGCGGGCAG ATAATTTTGC TAATGAAGCG GTCAGAATGG CGCTGGTTAA TCTTTCGGCT ATTGCCGCTC CAGCGGGTGC GATGCCGGTA GTATTAGGCG CAGGCTGGCC GGGCGTGCTG TTACATGAAG CGGTTGGTCA CGGGCTGGAA GGTGATTTCA ACCGTCGAGG CAGTTCGGTA TTCAGTGGGC AAATGGGCAA ATTGGTGGCT TCAGAACTCT GTACGGTGGT GGACGATGGC ACTATGCAAG GCCGCCGTGG CTCACTGGCT ATCGACGATG AAGGGGTGCC GGGTCAATAT AACGTGTTGA TCGAAAATGG CATTCTGAAA GGGTATATGC AGGATAAACT GAACGCGCGC CTGATGGGGG TAGCTCCGAC CGGTAATGGC CGTCGCGAAT CCTATGCGCA CCTGCCAATG CCACGCATGA CCAACACCTA TATGCTGGCA GGGCAATCGA CACCTGAAGA TATCATCGCC AGCGTGGAGT ACGGCCTGTA TGCGCCAAAT TTTGGTGGCG GTCAGGTGGA TATCACCTCT GGCAAGTTTG TGTTCTCAAC GTCCGAAGCG TACTTAATCG AAAAAGGCAA AATCACTCAC GCGGTGAAAG GGGCCACCCT GATTGGCTCT GGCATTGAAG CGATGCAGCA GATTTCTATG GTCGGCAACG ATCTGGCGCT GGATAAAGGC GTTGGTGTTT GTGGCAAAGA GGGCCAAAGC CTGCCGGTGG GTGTCGGTCA ACCCACGTTG AAGTTGGATA ATTTAACCGT GGGCGGCACG GCGTAG
|
Protein sequence | MSLSFVSEQL LTANKLNHED LFSVLGQLTE RRLDYADLYF QSSYHEAWVL EDSIIKDGSY NIDQGVGVRA VSGEKTGFAY ADQITLNALQ QSAHAARSIV RDTGNGKVHT LGEIAYQALY PLLDPLQSLS REDKIALLHR VDKVARAADK RVQEVSASLT GVYEQILVAA TDGTLAADVR PLVRLSVSVL VEDNGKRERG ACGGGGRFGY DYFLETVDGE VRADNFANEA VRMALVNLSA IAAPAGAMPV VLGAGWPGVL LHEAVGHGLE GDFNRRGSSV FSGQMGKLVA SELCTVVDDG TMQGRRGSLA IDDEGVPGQY NVLIENGILK GYMQDKLNAR LMGVAPTGNG RRESYAHLPM PRMTNTYMLA GQSTPEDIIA SVEYGLYAPN FGGGQVDITS GKFVFSTSEA YLIEKGKITH AVKGATLIGS GIEAMQQISM VGNDLALDKG VGVCGKEGQS LPVGVGQPTL KLDNLTVGGT A
|
| |