| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0395 |
|---|
| Symbol | yedY |
|---|
| ID | 5386738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 453900 |
|---|
| End bp | 455000 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640863364 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_001399388 |
|---|
| Protein GI | 153947388 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAACA CGTTTACTCA TACTAAAAAC AATACTCATA CTAAAAACAA TACTCAGGCT
AAAAACAGCG GTTCTCAGAC GAAAAGCAAT GCGGTCAGTC TCCATAAGCC ACGAAAACTG
ACTGAGGCAG ATGTCACGCC AGAGAGTATT TTTTATCAAC GACGTAAGGT GTTGCAGGCT
CTGGGGATCA CCGCCGCCAC CTTGGCTTTG CCAGCATCAG CACAAGCCGA TTTACTGGCC
TGGTTTAAAG GTAACGAGCC GCCCAAAGCG CCCTCAGGTA AACCATTGAC GTTCACCCCA
TCAGCCGCTT ACCACCCAGA CTTGGCTTTA ACGCCAGAAG ACAAAGTGAC CGGGTACAAT
AATTTCTATG AGTTTGGGTT GGATAAAGCT GATCCCGCCG CGAATGCTGG CACGCTGAAA
ACAGAGGACT GGCAGATTAA GATTGACGGC GATGTCGTTA AGCCCATGAC GTTGGATATG
GATTATCTGA TGAAATGCTT TCCCCTTGAA GAGCGAATCT ATCGCCTACG CTGCGTCGAA
GCGTGGTCGA TGGTCGTGCC ATGGATCGGT TTTGAGTTAG GGAAACTGCT GAAATTAGCA
GAGCCAACCA GTAACGCCCG CTATGTGGCG TTCCAAACAT TGTATGCTCC AGATCAAATG
CCTGGGCAGA AAAACCGCTT TATTGGCGGG GGACTGGACT ACCCCTATGT CGAAGGGCTG
CGGTTGGATG AAGCCATGCA CCCGCTGGCC TTTATGGTTG TTGGCGTGTA TGGCAAAACC
CTGCCTCCGC AAAATGGTGC GCCGCTGCGA CTCATGACGC CGTGGAAATA TGGCTTTAAG
AGCATTAAGT CCATCGTGCA TATTCGCCTG ACACGTGATC AGCCGCCAAC CACCTGGAAT
TTTAGCGCCC CCAACGAATA TGGCTTTTAT GCCAATGTGA ACCCGCACGT CGATCACCCC
CGCTGGTCAC AGGCCACCGA GCGCGTTATC GGTTCTGGCG GTATTCTGGA TGTAAAACGC
CAGCCCACCC TGTTATTTAA CGGCTATGCT GATCAAGTGG CATCGCTATA TCGTGGTTTA
GATTTGCGGA AGAATTTCTA A
|
|---|
| Protein sequence | MHNTFTHTKN NTHTKNNTQA KNSGSQTKSN AVSLHKPRKL TEADVTPESI FYQRRKVLQA
LGITAATLAL PASAQADLLA WFKGNEPPKA PSGKPLTFTP SAAYHPDLAL TPEDKVTGYN
NFYEFGLDKA DPAANAGTLK TEDWQIKIDG DVVKPMTLDM DYLMKCFPLE ERIYRLRCVE
AWSMVVPWIG FELGKLLKLA EPTSNARYVA FQTLYAPDQM PGQKNRFIGG GLDYPYVEGL
RLDEAMHPLA FMVVGVYGKT LPPQNGAPLR LMTPWKYGFK SIKSIVHIRL TRDQPPTTWN
FSAPNEYGFY ANVNPHVDHP RWSQATERVI GSGGILDVKR QPTLLFNGYA DQVASLYRGL
DLRKNF
|
|---|
| |