Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0383 |
Symbol | |
ID | 5384908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 442447 |
End bp | 443121 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640863352 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001399376 |
Protein GI | 153950544 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00000295575 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGCGG GAATGGGTGT GATTAAACCT GAGACCTTGC GCTATCAGGT TGAAAATGTA CTGCGGCAAG CGATCATGTC AGGGCGTTTT ACACCAGGGG AGCGGCTGAT TGAACGAGAA CTGTGTGAAA CCTTAGGCGT CAGCCGGACA TCAATTCGTG AAGCTTTACG TAGGCTTGAA GCTGAAAAAC TGGTCTCCAT TGTGCCGCAC AAAGGCCCGA TAGTGGCGAT TATCTCCAGG CAAGAAGCTG CTGAGTTATT CGCCCTGCGC GGTCTCTTGG AGGGGTTTGC CGCCCGTGAA TTTGCCCAAC GGGCAACGGA TGTAGCGATT GTGCATTTCG CACAAGCTAT TCAGGCGCTG CGCATGGCAG GCATGACAAA GGATCGGGCC AAGGTACTGA AGGCGAAAAC AGATCTTTAT GACGTGTTGC TGGACAATTG TGGCAATGGG TTGGTGAAAG AGACCTTAAC CAGCTTACAT TCGCGGATTA ACTTATTGCG CGCGACTTCG CTAATGGATC CGCAGCGTTT ACCTGTCAGC ATTAATGAGA TCGACGATCT GTATCAGGCG TTAAAAGCGC GGGATCCCGA TGCGGCACAG GCAGCGGCAG AACGGCATGT CGCCAATGCA AAAGAAGTTG CTCTGCGGAT CCTTGAGGAG ACCAACGCGA CGTAG
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Protein sequence | MLAGMGVIKP ETLRYQVENV LRQAIMSGRF TPGERLIERE LCETLGVSRT SIREALRRLE AEKLVSIVPH KGPIVAIISR QEAAELFALR GLLEGFAARE FAQRATDVAI VHFAQAIQAL RMAGMTKDRA KVLKAKTDLY DVLLDNCGNG LVKETLTSLH SRINLLRATS LMDPQRLPVS INEIDDLYQA LKARDPDAAQ AAAERHVANA KEVALRILEE TNAT
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