Gene YpsIP31758_0381 details

Gene Information

• Locus tag: YpsIP31758_0381
• ID: 5387755
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 440444
• End bp: 440839
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640863350
• Product: carboxymuconolactone decarboxylase family protein
• Protein accession: YP_001399374
• Protein GI: 153947368
• COG category: [S] Function unknown
• COG ID: [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 0.07667
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGCTC AAGATCGTTT TGAACGGGGT TTTCACAACC GAAAAGCAGT ACTGGGCGCG 
GAACATGTTG AAACATCATG GGGTAATTCG GATGAATTCA ACCGACCGGT GCAAAAACTG 
ATCACTGAAT ATTGCTGGGG AGAGATCTGG GGGGATCCGG CACTCACTTT TAAAACTCGC 
AGTATGCTGA ATATTGGCAT TCTCACGGCG ATGGGCCAGC ATCATGAGCT TTCTTTACAC 
GTTAAAGGCG CGCTGAGAAA TGGTGTCACA CGCGAGGAGA TACGCGCGGT GTTGCTACAA 
ACCGTGGTGT ATTGCGGTGC GCCAGTCGCG CTGGCGGCGT TTCGTATTGC CAGTGCCGCA 
ATCACAGCGT ATGACGATGA GATTGCTGAC AGTTAG 

 

Protein sequence

MVAQDRFERG FHNRKAVLGA EHVETSWGNS DEFNRPVQKL ITEYCWGEIW GDPALTFKTR 
SMLNIGILTA MGQHHELSLH VKGALRNGVT REEIRAVLLQ TVVYCGAPVA LAAFRIASAA 
ITAYDDEIAD S