| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0378 |
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| Symbol | pcp1 |
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| ID | 5385677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 437542 |
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| End bp | 438009 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640863347 |
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| Product | outer membrane lipoprotein PcP |
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| Protein accession | YP_001399371 |
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| Protein GI | 153949837 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3133] Outer membrane lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGC TGGCCATTGC CGTTGCACTT GCCGCCACCG TATTAAGCGG ATGTGCCAAT
AACACTGCGT CTGGTGATAC TTTTACTGCC TCTCAGGCAC GACAAGTACA GACCGTCACT
TACGGCTCGA TAGTGTCTGC CCGCCCGGTC ACCATTCAGG GCGGCAATAA TAATAATGTT
GCCGGTGCCA TTGGCGGTGC CGTAGTGGGT GGATTCTTAG GGAATACTAT TGGCGGTGGC
CGGGGTAATA GCTTGGCAAC TGCGGGTGGT GCCGTTGCTG GTGGCGTAGC AGGCCAGGGT
ATCCAGAGTG CGATGAACCG CAGTGAAGGG GTTCAACTGG AAATTCGCCG TGATGATGGC
AGCAATATTG TTGTTGTACA GGCTCAGGGG CCTACCCGTT TCAGTGCTGG CCAACGCGTG
ATAATCGCCA GTGATCGTAG CGGTACCGTC ACGGTTTCTC CTCGCTAA
|
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| Protein sequence | MNKLAIAVAL AATVLSGCAN NTASGDTFTA SQARQVQTVT YGSIVSARPV TIQGGNNNNV
AGAIGGAVVG GFLGNTIGGG RGNSLATAGG AVAGGVAGQG IQSAMNRSEG VQLEIRRDDG
SNIVVVQAQG PTRFSAGQRV IIASDRSGTV TVSPR
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