| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0353 |
|---|
| Symbol | |
|---|
| ID | 5384513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 412629 |
|---|
| End bp | 413750 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640863322 |
|---|
| Product | alkanesulfonate transporter substrate-binding subunit |
|---|
| Protein accession | YP_001399346 |
|---|
| Protein GI | 153948409 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTAT CTTTCTTCTT TCGTCGTGGG TTCAACGTTC ACCGCTGGCT CAATATCGGG
GCAATGGCCG CTATTATTAC GTTAGCGTTT ACTAATACAG TGATTGCACA GGATAGCGCC
CCGGCCCAGT TCCGCATTGG GTACCAAAAA GGCTCGGTGA ATCTGGTGTT GGCGAAAACT
CACCAATTGC TGGAAAAACG CTTTCCTGAT ACCCAAATTA GCTGGATTGA ATTCCCGGCA
GGCCCGCAAA TGCTCGAAGC GTTGAACGTC AACAGCATCG ATTTGGGCAG TACTGGCGAT
ATTCCCCCCA TTTTTGCTCA GGCTGCTGGC GCTGATCTGC TGTATGTCGG CATGGAGCCG
CCGAAACCGA AGGCAGAAGT GATTTTGGTG CCGGAAAACA GCGCAATTAG CAGCGTTGCT
GAACTGAAAG GCCATAAAGT GGCTTTCCAG AAAGGTTCCA GCTCACACAA CCTGCTCTTG
CAGGCACTGC AAAAAGCGGG GCTAAAATTT ACCGATATCC AACCTGTCTA CCTCACGCCT
GCTGATGCAC GAGCGGCTTT CCAACAGGGC AATGTTGATG CTTGGGTCAT TTGGGATCCC
TACTATTCCG CCGCCTTGTT GCAAGGGGGC ATACGGGTAC TGATAGATGG CAGCCAATTA
AATCAGACGG GCTCTTTTTA TCTGGCTTCT CGTCCTTATA CCGAAGCTAA CGGCCCATTT
ATTCAGCAGG TGCTGGAGGT GCTGACGCAG GCTGATGCGT TGACGCTTAG CGATCGAGCA
CAAAGTATCA CGCTACTAGC CAACGCGATG GGGCTACCAG AGGCCGTGAT TGCCAGCTAT
CTGGATCATC GTCCCCCCAC GGCTATCCAG CCTTTGAGTC AGGCGACGGT TGCTGCCCAA
CAAAGAACGG CCGATCTGTT TTTCGCCAAC CGGCTGTTAC CGGTCAAAGT GGATATTTCG
CAACGTGTTT GGCAGCCAGC CGGGCAATTA TCCTCAAAGC CACCATCTTC AAAGCCATCA
TCTTCAAAGC CATCATCTCC AAGCCAATTA CCTACAGATC AACCGTCTAT AGCGCAGACA
TCTATAGAGC AATCATCTAC AGCAAAATCA CAGACCAAAT AA
|
|---|
| Protein sequence | MSLSFFFRRG FNVHRWLNIG AMAAIITLAF TNTVIAQDSA PAQFRIGYQK GSVNLVLAKT
HQLLEKRFPD TQISWIEFPA GPQMLEALNV NSIDLGSTGD IPPIFAQAAG ADLLYVGMEP
PKPKAEVILV PENSAISSVA ELKGHKVAFQ KGSSSHNLLL QALQKAGLKF TDIQPVYLTP
ADARAAFQQG NVDAWVIWDP YYSAALLQGG IRVLIDGSQL NQTGSFYLAS RPYTEANGPF
IQQVLEVLTQ ADALTLSDRA QSITLLANAM GLPEAVIASY LDHRPPTAIQ PLSQATVAAQ
QRTADLFFAN RLLPVKVDIS QRVWQPAGQL SSKPPSSKPS SSKPSSPSQL PTDQPSIAQT
SIEQSSTAKS QTK
|
|---|
| |