Gene YpsIP31758_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0348 
Symbol 
ID5385643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp409216 
End bp409719 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content53% 
IMG OID640863317 
ProductRbsD/FucU family transport protein 
Protein accessionYP_001399341 
Protein GI153949129 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1869] ABC-type ribose transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACCCG ATAGAATCTT ACACCCTGAA CTTGCCGCCG CTTTAGCCAC CTTAGGCCAT 
ACCGACATTA TATTGGTCAC GGATGCAGGC TTCCCGATCC CGCCGCAGGC TAAACGTATC 
GATTTGGGGT TTTGGCCTGG CACCGTTGAT GTACTGGATA TTCTGCGCGT CCTACGCAAA 
GAAATTTTTG TGGAAGAAGT CCGTTTTGCC AGTGAAGTCC GGGATTGTCA CCCGCAACTT 
TATCGTGACG TACAAACCCT CTATACCGGC TCCGGCGCTG AATTTCAGGC AGCCAGTCAC 
GAAACGCTCT GCCACGACCT TGCCCACCAA GCCAAAGTTG TTATCCGTTC CGGATCATTT 
AATCCGTGGG CCAATTTCGC GCTGGTTGCC AGTACCGATC CTTTTGCCTG GTTCACCGAT 
GAATCTGGCG TAAAACCGCT GCCCGCTTAT GTCGCAAGAC GGCAACGCAT TCTCGACAAC 
GTCGTACCGG AACTCAACGC CTAG
 
Protein sequence
MRPDRILHPE LAAALATLGH TDIILVTDAG FPIPPQAKRI DLGFWPGTVD VLDILRVLRK 
EIFVEEVRFA SEVRDCHPQL YRDVQTLYTG SGAEFQAASH ETLCHDLAHQ AKVVIRSGSF 
NPWANFALVA STDPFAWFTD ESGVKPLPAY VARRQRILDN VVPELNA