| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0344 |
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| Symbol | |
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| ID | 5385670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 405893 |
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| End bp | 406792 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640863313 |
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| Product | AP endonuclease |
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| Protein accession | YP_001399337 |
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| Protein GI | 153946920 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAACG TTGGCATCTT TACCGGTTAT TACCCTTACA CCCTGAGTGG CACCATCGAC
AAAATTAAGC AGGCGGGTAT GGGATGTGTG CAACTCGATC TTGAGTTCAC CGACATTGAT
CTTCGCCGGG GGCGCATTAC CAAAGAAAAA GCGCATCAGG TACGTAATGC ATTTCGTCGG
GCGAATATTC CCATTGTGGC TATCTCGGCG TATACCAACT TAGTTCATCC GGACCCGGTA
AAACGTGCGG AAAATATTGC TGCGGTGAAA GAGATCCTCG CTCACGCTCG TCACTTTGGC
ACGCCATATG TCATTAGTGA AACCGGAACT TATAATACGG ACAGTGACTG GCTGTACGAT
CCTAAAAATA GTACTGAAGA GGCTTATCAG GAATTTAAAG CTATCGCCAA AGAGTTAGCG
ACCTTTGCCT ATGAGCATAA TGCGGTGTTC CTCGTGGAAA ATTACGTCAA TAACATCATC
GGTTCCGTAG GACAGGTTGC CCGATTGATG CAAGAAGTTG AACATCCCGG ATTAGGATTA
GCCTTGGATC CCACCAACTA TTTTGACGAT AAAAACATAG ATGCTATTGA TGAAACACTG
CACAACATTT TTAACGTACT CGAGAGCAGA ATAAAAATCG CTCATGCCAA AGACTGTAAA
AAAACAGATG CTATCGCAGA GAAATTTGGT GGAGGTGCCG CGGAACATAA CAGCTTTAGA
GGGGCGGGTT CAGTAGAATT ACCGGCAGCA GGATTAGGCG CGTTGAATTA TCCGTTATAT
GTCGAGTTGC TGGCCCAGAA GCATCCTAAT ATTCCACTGA TTATTGAACA TGTTGATGAA
GAGGATATCC CCCGAGCCAA ACGCTTTGTT GACGAGGTTT TAATGGCAAC AGGCAGTTGA
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| Protein sequence | MINVGIFTGY YPYTLSGTID KIKQAGMGCV QLDLEFTDID LRRGRITKEK AHQVRNAFRR
ANIPIVAISA YTNLVHPDPV KRAENIAAVK EILAHARHFG TPYVISETGT YNTDSDWLYD
PKNSTEEAYQ EFKAIAKELA TFAYEHNAVF LVENYVNNII GSVGQVARLM QEVEHPGLGL
ALDPTNYFDD KNIDAIDETL HNIFNVLESR IKIAHAKDCK KTDAIAEKFG GGAAEHNSFR
GAGSVELPAA GLGALNYPLY VELLAQKHPN IPLIIEHVDE EDIPRAKRFV DEVLMATGS
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