Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0322 |
Symbol | clpV2 |
ID | 5386676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 372422 |
End bp | 375025 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640863292 |
Product | type VI secretion ATPase |
Protein accession | YP_001399316 |
Protein GI | 153950295 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAAA TTGACTTGCC CACACTCGTA AACCGCCTTA ATCCCATTGC CCGCCATTCT CTGGAAGCGG CGGCGGCGCA TTGCGTCAGT CAGCAGGAAG CTGAAATTAC GGTCTCCCAA GTGCTACTGC AAATGATCTC CACACCATTA TGTGATGTCA GGTTAATCCT GAGCCATGCG GGTGTTGAGG AGGATGAACT ACGGGAGTCG CTCGATCAAC GTGTTTCAGG CTATCAAGCT ATTACCCAGG CCTACCCGAG TTTTTCCCCA TTACTGGTGG AATGGTTACA AGACAGTTGG TTGCTGGCAT CGACAGAGAT GGAACACAGC CAACTCCGTA GCGGCGTGAT GTTATTGACG TTATTGCTCA GCCCGTCGCG CTATCTGGTT CCCACGGCCA ACCGGCTACT GTCTCCGATT AACCGTGAGT TACTGCGTCA GAATTTTGCT AACTGGACGG CAGACTCAGC AGAAACACCG CGAGCAGAAA AAGGGGCTGA AGCTGGCAAC GGCGCAGAAA TCAATGGTGA CAGCTTGCTG GCCCGCTATG CCAGCAATAT GACCGAACAG GCCCGTAACG GCGAATTAGA CCCTGTGCTG TGTCGAGATA CCGAAATCGA TCTGATGATC GATATTCTGT GCCGCCGCCG CAAAAATAAC CCGATAGTGG TGGGTGAAGC GGGGGTAGGG AAAAGTGCGC TGATCGAAGG TTTAGCCCTG CGTATCGTGG ATAATCAGGT GCCAGAAAAA CTGCGTAACA GCGAGTTGAT GACGCTGGAT TTAGGCGCGC TTCAGGCTGG TGCGGCAGTG AAAGGCGAAT TTGAGAAGCG TTTCAAGGGC ATCATGGCGG AAATTGCGCA GTCCACGACG CCAATTATCC TGTTTATTGA TGAAGCACAC ACGCTGATCG GGGCCGGTAA CCAACAGGGC GGATTAGACA TTTCCAATCT GCTCAAACCC GCTTTAGCGC GTGGTGAACT GAAAACGATT GCGGCAACCA CCTGGAGCGA ATACAAAAAA TACTTTGAAA AAGATGCTGC GCTGTCGCGC CGTTTCCAGT TGGTCAAAGT TTCTGAACCC AGCGCGCAAG AGGCCACGAT TATCATGCGT GGCCTACGTA CAGTTTATGA ACAGGCGCAT GGCGTCCTGA TCGATGATGA AGCATTGCAA GCTGCGGCGG TGCTCAGTGA CCGCTATATT TCAGGGCGGC AGTTGCCAGA TAAAGCCATC GACGTGTTAG ATACCGCAGC CGCACGTGTT GCCATCAATC TCACCTCTGC ACCGCGTCAG GTTTCGGCAC TGAAAAACGA ACTCTACCAT CAGGGGATGG AAATCGAGAT GCTGGAGCGG GAGCAACGCC TCAGCTTAAG CCGCCCGGAT GAGCGGTTAT CCGTTTTACA ACAGCAGCGA ATTGAGATCG AACAGCAACT CATTGCCCTG AATACCGGTT GGGAAAAGCA ACAACATTTG GTCCAGCAGA TTATCGCACT GAGAGCGGTC CTGTTGGCAC AAGAAGAGAG CGCCACAGAT GAGCAAGTGG TCAATCTGAC AGCGCTGAGC GATGAGTTGG AACGGTTGCA ACAGCACCAG ACGCTGGTCT CGCCCCATGT GGATAAGAGC CAGATTGCGG CGGTGATCGC GGAATGGACC GGTGTACCGC TAAACCGCCT TTCTCAGAGT GAATTGGCAG TGGTCACTGA ATTGCCCTCT TACCTGGGGC AGCAGATCAA AGGGCAAGAG ACGGCTATCC ATTGCTTGCA CCAACACTTG CTGACCGCAA GGGCGGATTT ACGTCGCCCA GGTCGCCCAA TGGGGGCTTT CCTGTTGGTT GGGCCTAGCG GCGTGGGTAA AACGGAAACC GTGCTACAGA TTGCCGACCT GCTCTATGGC GGCCGCCAAT ATCTCACCAC CATCAATATG TCCGAATTCC AAGAGAAGCA TACCGTCTCG CGCCTGATTG GTTCACCTCC GGGCTACGTC GGGTATGGTG AAGGCGGCGT ACTGACCGAA GCCATTCGCC AAAAACCTTA CTCGGTAGTG CTACTGGATG AAGTGGAAAA AGCCCACCCC GATGTGCTGA ATCTGTTTTA TCAGGCCTTC GATAAGGGCG AGTTGGCGGA CGGTGAAGGC CGCATCATTG ATTGCAAAAA TATCGTATTT TTCCTGACTT CTAATCTGGG ATACCAGACC ATTGTTGATC ATGCAGACGA GCCTGCATTG CTCAATGAAC GGCTCTACCC CGAGCTATCG GCATTCTTTA AACCTGCGCT ACTGGCTCGC ATGGAAGTGG TCCCTTATCT GCCGCTGGGC ATGGAAACGC TGCAAATTAT CATTCACGGC AAACTGAACC GTCTGGATAC GCTGCTGCGC CAACGCTTTA GTGCTGATGT GGTCATTGAA CCTGAAGTGA TCGACGAAAT CCTGCTACGC GCGACCCGTG CCGAAAATGG TGCGCGTATG CTCGAGTCGA TTATCGACGG TGCGCTATTA CCACCGGTTT CTCTGTTGTT ATTACAGAAA GTGGCCGCCG GCACCGCTAT CAGCCACATT CGGATCGCGG TAGAGGGGAA TGTGTTTACT GCACAGGTTG AGGGAGCGAT ATGA
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Protein sequence | MIQIDLPTLV NRLNPIARHS LEAAAAHCVS QQEAEITVSQ VLLQMISTPL CDVRLILSHA GVEEDELRES LDQRVSGYQA ITQAYPSFSP LLVEWLQDSW LLASTEMEHS QLRSGVMLLT LLLSPSRYLV PTANRLLSPI NRELLRQNFA NWTADSAETP RAEKGAEAGN GAEINGDSLL ARYASNMTEQ ARNGELDPVL CRDTEIDLMI DILCRRRKNN PIVVGEAGVG KSALIEGLAL RIVDNQVPEK LRNSELMTLD LGALQAGAAV KGEFEKRFKG IMAEIAQSTT PIILFIDEAH TLIGAGNQQG GLDISNLLKP ALARGELKTI AATTWSEYKK YFEKDAALSR RFQLVKVSEP SAQEATIIMR GLRTVYEQAH GVLIDDEALQ AAAVLSDRYI SGRQLPDKAI DVLDTAAARV AINLTSAPRQ VSALKNELYH QGMEIEMLER EQRLSLSRPD ERLSVLQQQR IEIEQQLIAL NTGWEKQQHL VQQIIALRAV LLAQEESATD EQVVNLTALS DELERLQQHQ TLVSPHVDKS QIAAVIAEWT GVPLNRLSQS ELAVVTELPS YLGQQIKGQE TAIHCLHQHL LTARADLRRP GRPMGAFLLV GPSGVGKTET VLQIADLLYG GRQYLTTINM SEFQEKHTVS RLIGSPPGYV GYGEGGVLTE AIRQKPYSVV LLDEVEKAHP DVLNLFYQAF DKGELADGEG RIIDCKNIVF FLTSNLGYQT IVDHADEPAL LNERLYPELS AFFKPALLAR MEVVPYLPLG METLQIIIHG KLNRLDTLLR QRFSADVVIE PEVIDEILLR ATRAENGARM LESIIDGALL PPVSLLLLQK VAAGTAISHI RIAVEGNVFT AQVEGAI
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