Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0317 |
Symbol | |
ID | 5387476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 367277 |
End bp | 368308 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640863287 |
Product | hypothetical protein |
Protein accession | YP_001399311 |
Protein GI | 153950860 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTGAGA ATGTAAATGG GGTTGAGGCA AGACCCGAAG GGCAGGCATT GGATGTTTCA CGTTATAACT TTTTTCAATT GGTCGAATTG CTCAACCAAT TGGCGGTAGC GTGGCAAGGT GCGGCCCCTG TGGCGACCCC AGCCAATGAA GCCATCCGTT TTAAATCGAC CGCCAGTTTG GCATTCCCGA CCAGAGATGT GATCGCACTG GACACCTCCG CCCGAGGTCA ATTTGAGCTA GAGGTCTCTT TCCTTGGATT GCATGGCAGC CAATCGCCGC TACCAGGATA TTACCTCGAT TCGTTAGCGT GGGAGGATGC GCAGAATGAG AACCGGTTGA CGGATTTCAT GAACGTATTC AATCACCGCC TGTTAACGCT ACTGCATCAG ATTTGGCGTA AATACCGTTA CTACATCTGC TTTGACAATG GCGGTGATGA TGCATTTTCA CAACGCATGT TCTCGCTGGT GGGGTTAGGT AGCGAGGTCG TCCGCAATAA ATTGCAGATC AATCACAGCA AAATGCTGGC TTATGCAGGG CTGCTGGCCA GCCCCGGCAG AGCACCTGAA GTAATTTGCA GCCTTGTCTC ACATTGCTTC AATTTGCCAG ATATCACCTT ACACAGTTGG CAGCTACGCA AGGTGGATAT TGCCCCCTCA CAGCAGAATC GCTTGGGGAC GAGGGTGAAA GTCCGTGGCA AGAAATATGA TGAAAAATCA GTGCTTGGCG TTAATTTCTC CATCGGTTCA CGGGTTGCGG ATCGTAGCGG GAAATTCTTG TTGTGCATCA ATAAGCTGAC GCGAGAACAG TTCTTATCCT TTTTACCCAA CGGGGCTAAT TACGCCTCGT TAGTGATGTT TGTCGCCTTC ATTATGCGCG ATCAATTCGC GTGGGATTTA CGTCTTGGGT TGGCCGAGCA ACAGGTGGGC GGGATGGTTC TGGGAACCGA GCAAAATAGC CTCTTGGGCT GGACCAGTAT CCTCGGCGAT CCCGAACAGA AACCCAGCGT AACGATTGGT GTAATGGAAT AA
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Protein sequence | MVENVNGVEA RPEGQALDVS RYNFFQLVEL LNQLAVAWQG AAPVATPANE AIRFKSTASL AFPTRDVIAL DTSARGQFEL EVSFLGLHGS QSPLPGYYLD SLAWEDAQNE NRLTDFMNVF NHRLLTLLHQ IWRKYRYYIC FDNGGDDAFS QRMFSLVGLG SEVVRNKLQI NHSKMLAYAG LLASPGRAPE VICSLVSHCF NLPDITLHSW QLRKVDIAPS QQNRLGTRVK VRGKKYDEKS VLGVNFSIGS RVADRSGKFL LCINKLTREQ FLSFLPNGAN YASLVMFVAF IMRDQFAWDL RLGLAEQQVG GMVLGTEQNS LLGWTSILGD PEQKPSVTIG VME
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