Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0300 |
Symbol | |
ID | 5387955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 346478 |
End bp | 348166 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640863270 |
Product | hemolysin activator protein |
Protein accession | YP_001399294 |
Protein GI | 153950832 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.00625551 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGAA AACGTACTGC GTTATGGCTT GTACTCAGTA CTGGCGCTCA AGCCGAGACG CCTTTGGCCA TAGAGACCCC ATTTCCCATT AATGAATCTC GCCAGTCATT ACAAAATAAT GCTAAAGAAA TTAATCAGTT AATAGAAGAA AAGCGCCACC AACAGATAAC GCAACGCAAC ACCGGACAAG GTGAATTATC TCGCCCGGAA AACCCCGCTG CGCCAGAGCT GCCAGAAGAT ACACAGTGCT TGCCCATTAA TGGTGTTTAT ATTCAGGGGA TCACCTTATT AACAGAGGAT GATTTAAATG AATTAAGTGC GATACCTGAA CAATGTATTC ATCCGGAGAA CATTAACCTT CTGACCCGTG AACTCACTAA TATCTATATG GATAAAGGGT ATATCACGGC ACGTATTCAA TTTATTCCAC CAGATGCTGA TGGGAAGTTA GGTCTGGATA TTACCGAAGG GTTTGTCGAA GCGATTGATA GCACGGACAC CGGGTTAGAT GGTGAGACAG TCTTCCCGAA TATGATCGGT AAGCCGCTCA ATATTACTCG CCTTGACCAA GGGTTGGACC AGGCAAACCG TTTGCCCTCA AATAAAGTCA CCGTCGATAT TCTGCCCGGA ACACTGCCCG GTGGATCTAT TCTTAAACTG CATAATACAC CGTCAACCCC TTGGCATTTG ACCACCTCAC TCGACAATTA CGGCAATAAA AATACCGGTG AATGGCTAAA TCGCAACGCC TTGTCTTTTG ATAATCCACT GGGCTTATCG GATTCTGTCA GTATCAATAT CAGTAATACC GTTGATCGCC CCCAACATAA TTATAGCCGT GCTTACTCAA TGTTTTATTC GGTCCCCTAC GGTGCCTTGA CCTTTAGTGG CTTTGGCAGT TATGCCGAAT ACCGCTATCC GCTGAAATTG CAGTTTAATA CAGTCAAGTT ACATGGAGAA ACACAGCAAC ACGGTTTACG GGCAGATTAT GTTTTCTATC GCGATCAAAA CCAGATTAAT GGGCTAAGTG CGCAATTAAC CTATAAACGG GCCAGTAATT ATCTGAATGA AGAAAAAATT GCGATCAGCA GCCCGACGCT AACAATCTTT GAATTAGGTC TTAATCACCT GCACGTCCTG CCAATGGGTC TGTTTAATAT CAATGTCAGC ATTGAGCAGG GCTTGCCTTG GCTGGGCGCC GAGCGCTCAA ATGGCCCATT AGCGAACTAT CAGGATAGCC AATTCACTAA AGCTAAGGCT TCAATTACTT CCAATCACTA TTTTGCACTG TTTGATGATG CCTATCTGCT CAGCAATCAA TTTTATGGCC AGTACACCCG TGACCGGTTA CCCGGTGTGG AATGGCTCAG CATCACTGAC AGCACTGCCA TCCGTGGCTT TAGCCGCAAT ACCTTATCCG CCGATCAAGG CTGGTACTTA CAAAATACCC TTTCCCGTCG TTTCACCTTG GGTGACGCCA CGCTAACCCC TCGCGTAGGC CTGGATACGG GCCGTATCCA GCAAAAGCCA CAGGGGTGGG TCAGCGCTAT GGGGCTAAGC GCTGGCGTCA GCCTTAATTA CCAGAATGCC ACATTGGATA TAGAGGCCAG CCGCGGCCAC TTACTCTCCG GCCCATCGAA GATTAACGAT CCAACACAAA TTCTGGCGCG TTTTTCTTAC CGCTTTTAA
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Protein sequence | MIRKRTALWL VLSTGAQAET PLAIETPFPI NESRQSLQNN AKEINQLIEE KRHQQITQRN TGQGELSRPE NPAAPELPED TQCLPINGVY IQGITLLTED DLNELSAIPE QCIHPENINL LTRELTNIYM DKGYITARIQ FIPPDADGKL GLDITEGFVE AIDSTDTGLD GETVFPNMIG KPLNITRLDQ GLDQANRLPS NKVTVDILPG TLPGGSILKL HNTPSTPWHL TTSLDNYGNK NTGEWLNRNA LSFDNPLGLS DSVSINISNT VDRPQHNYSR AYSMFYSVPY GALTFSGFGS YAEYRYPLKL QFNTVKLHGE TQQHGLRADY VFYRDQNQIN GLSAQLTYKR ASNYLNEEKI AISSPTLTIF ELGLNHLHVL PMGLFNINVS IEQGLPWLGA ERSNGPLANY QDSQFTKAKA SITSNHYFAL FDDAYLLSNQ FYGQYTRDRL PGVEWLSITD STAIRGFSRN TLSADQGWYL QNTLSRRFTL GDATLTPRVG LDTGRIQQKP QGWVSAMGLS AGVSLNYQNA TLDIEASRGH LLSGPSKIND PTQILARFSY RF
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