| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0295 |
|---|
| Symbol | aceA |
|---|
| ID | 5387975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 333293 |
|---|
| End bp | 334600 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640863265 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_001399289 |
|---|
| Protein GI | 153947695 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.474355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCT CTCGTACTCA ACAAATTCAG CAGTTGGAAC AGGAATGGAC ATCGCCGCGC
TGGAAAAATA TCACTCGGCC TTATAGCGCC GAAGATGTCA TCAAGCTGCG TGGTTCGGTC
AATCCAGAAT GTACGTTCGC ACAAAATGGT GCCAAAAAAC TGTGGGAATT GCTGCACGGC
GGGTCGCGTA AAGGGTATAT CAACTGTCTG GGGGCATTAA CCGGTGGTCA GGCGCTACAA
CAGGCGAAAG CCGGTGTTGA AGCCATTTAT CTGTCGGGAT GGCAGGTGGC GGCTGATGCT
AATACGGCAT CTAGCATGTA TCCAGATCAG TCACTGTATC CGGTCGACTC TGTGCCTGCG
GTGGTGAAAC GTATCAACAA TAGCTTCCGC CGCGCTGATC AAATTCAGTG GTCGAATAAT
ATTGAGCCAG GTAGTAAAGG CTATACCGAC TATTTCCTAC CGATCGTCGC GGATGCGGAA
GCGGGTTTTG GCGGTGTGCT GAACGCGTTT GAATTAATGA AAGCGATGAT TGAAGCGGGG
GCGGCAGGGG TTCATTTTGA AGACCAATTG GCCGCAGTGA AAAAGTGTGG GCATATGGGC
GGTAAGGTAC TGGTGCCGAC ACAAGAGGCC ATTCAAAAGC TGGTTGCTGC CCGTTTAGCC
GCAGATGTCT TGGGTGTACC AACGCTGTTG ATTGCCAGGA CTGATGCGGA TGCGGCTGAT
TTATTGACCT CAGATTGCGA CCCCTATGAC CGGGAGTTTA TTACCGGCGA CCGTACTGCT
GAAGGTTTTT TCCGCACCCG TGCCGGTATT GAACAAGCGA TCAGCCGTGG CCTGGCGTAT
GCCCCTTATG CTGATTTGGT GTGGTGTGAA ACCTCGACAC CTGATCTGGC TCTGGCCAAA
CGTTTTGCCG ATGCTGTTCA TGCTCAATTC CCCGGAAAAT TACTGGCTTA TAACTGTTCA
CCCTCCTTTA ACTGGAAGAA GAATCTGACC GACCAGCAAA TTGCCAGCTT CCAGGATGAA
CTCTCCGCCA TGGGCTACAA ATACCAGTTT ATTACGCTGG CGGGTATTCA TAGCATGTGG
TTCAACATGT TCGATCTGGC CCATGCGTAT GCGCAGGGTG AAGGCATGAA ACACTACGTT
GAGAAAGTCC AGCAACCTGA GTTTGCTTCT GTGGACCGCG GCTACACCTT TGCTTCCCAT
CAGCAAGAAG TGGGGACTGG CTACTTCGAT AAAGTCACCA ATATTATTCA GGGGGGCGCA
TCATCTGTAA CGGCACTGAC CGGTTCGACG GAAGAGCAGC AGTTTTAG
|
|---|
| Protein sequence | MTISRTQQIQ QLEQEWTSPR WKNITRPYSA EDVIKLRGSV NPECTFAQNG AKKLWELLHG
GSRKGYINCL GALTGGQALQ QAKAGVEAIY LSGWQVAADA NTASSMYPDQ SLYPVDSVPA
VVKRINNSFR RADQIQWSNN IEPGSKGYTD YFLPIVADAE AGFGGVLNAF ELMKAMIEAG
AAGVHFEDQL AAVKKCGHMG GKVLVPTQEA IQKLVAARLA ADVLGVPTLL IARTDADAAD
LLTSDCDPYD REFITGDRTA EGFFRTRAGI EQAISRGLAY APYADLVWCE TSTPDLALAK
RFADAVHAQF PGKLLAYNCS PSFNWKKNLT DQQIASFQDE LSAMGYKYQF ITLAGIHSMW
FNMFDLAHAY AQGEGMKHYV EKVQQPEFAS VDRGYTFASH QQEVGTGYFD KVTNIIQGGA
SSVTALTGST EEQQF
|
|---|
| |