Gene YpsIP31758_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0286 
SymboltrkH 
ID5388489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp320311 
End bp321762 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content47% 
IMG OID640863252 
Productpotassium transporter 
Protein accessionYP_001399283 
Protein GI153948812 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000018042 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTTC GTGCCATAAC CCGTATTGTT GGTCTGCTGG TCATCTTATT CTCCGGAACA 
ATGTTTATTC CCGGGCTGGT GGCTTTGATC TATCGTGATG GTGCTGGCCG TGCCTTCAGT
GAAACTTTTT TTGTTGCTGT GTCTATCGGG CTTTTGCTTT GGTTACCGAA TAGAAAGCAG
AAGCATGAGT TAAAACCTCG CGAGGGTTTT CTCATCGTCG TATTATTTTG GACGGTGTTG
GGTAGTGTCG GGGCATTACC TTTTTTATTC TCAGAGCGGC CTAATCTTTC ATTAACTGAT
GCATTCTTTG AATCATTCTC AGGGTTAACT ACCACAGGGG CAACTACCTT AGTGGGGTTG
GAGTCACTTC CCAAAGCAAT TCTATTCTAT CGACAAATGC TGCAATGGCT TGGTGGGATG
GGGATCATCG TACTCGCTGT GGCTATTTTG CCAATTTTGG GCGTCGGGGG GATGCAGCTC
TATCGTGCAG AAATGCCTGG TCCGCTGAAA GATAATAAAA TGCGGCCCCG CATTGCTGAA
ACGGCTAAAA CGCTCTGGCT CATCTATGTA CTACTGACTA TCGCTTGTGC GCTTGCCCTT
TGGGGAGCAG GGATGTCGGT ATTTGATGCT ATTTCTCATA GTTTTTCGAC AATAGCTATC
GGTGGTTTTT CAACCCATGA TGCCAGCATT GGGTACTTTA ACAGCCCAAC GATCAACACA
ATTATTGGCA TATTCTTGCT GATTTCTGGC TGTAATTTTG GTTTACACTT TGCGGTACTC
AGTGGCAGAA GCTTGAAAGT CTATTGGCGT GATCCCGAAT TCCGTATGTT TATCTTTGTA
CAATTGACGC TAGTTATCGT TTGTACCTTA GTGCTCTGGC AACATAGTGT ATATAAGTCC
GGAATAGAAA CCTTAAATCA GGCGTTCTTC CAAGTGGTTT CAATGGCTAC TACGGCGGGC
TTCACGACCG ACAGCATTGC GAAATGGCCG CTCTTCTTGC CCCTACTCTT ATTATGTTCT
GCTTTTATTG GTGGTTGTGC GGGGTCTACC GGGGGCGGCC TAAAAGTTAT TCGTATCCTA
TTACTCTACT TACAAGGTTC ACGCGAGTTA AAACGGTTGG TCCACCCTAA TGCGGTTTAC
ACCATTAAAC TGGGGCGGCG TGCATTACCC GAGCGGATTC TTGAAGCGGT TTGGGGCTTT
TTCTCTGCTT ATGCGCTGGT CTTCATTATC AGTATGTTAG CGATCGTCGC GACTGGGGTT
GATGAATTTT CTGCCTTCGC TGCTGTCACT GCGACGTTGA ATAACCTCGG GCCCGGTTTG
GGGGTAGTGG CTGATAACTT TACATCTATG AATCCCGCAG CCAAATGGAT ATTGGTGATT
ACGATGTTAT TTGGCCGGCT GGAAGTCTTC ACTTTGCTAG TCCTTTTCAC CCCAACATTT
TGGCGCGAGT AG
 
Protein sequence
MHFRAITRIV GLLVILFSGT MFIPGLVALI YRDGAGRAFS ETFFVAVSIG LLLWLPNRKQ 
KHELKPREGF LIVVLFWTVL GSVGALPFLF SERPNLSLTD AFFESFSGLT TTGATTLVGL
ESLPKAILFY RQMLQWLGGM GIIVLAVAIL PILGVGGMQL YRAEMPGPLK DNKMRPRIAE
TAKTLWLIYV LLTIACALAL WGAGMSVFDA ISHSFSTIAI GGFSTHDASI GYFNSPTINT
IIGIFLLISG CNFGLHFAVL SGRSLKVYWR DPEFRMFIFV QLTLVIVCTL VLWQHSVYKS
GIETLNQAFF QVVSMATTAG FTTDSIAKWP LFLPLLLLCS AFIGGCAGST GGGLKVIRIL
LLYLQGSREL KRLVHPNAVY TIKLGRRALP ERILEAVWGF FSAYALVFII SMLAIVATGV
DEFSAFAAVT ATLNNLGPGL GVVADNFTSM NPAAKWILVI TMLFGRLEVF TLLVLFTPTF
WRE