| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0283 |
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| Symbol | fadB |
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| ID | 5385498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 315813 |
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| End bp | 318002 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640863249 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001399280 |
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| Protein GI | 153947422 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00882549 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTACC AAAGCGAAAC ATTACAGCTT CACTGGTTGG AAAACGGTAT TGCCGAGTTG
GTATTTGATG CTCCGGGTTC AGTTAATAAA CTGGATACTA AAACCGTAGC CAATTTGGGT
GAAGCCTTGA ATGTGTTAGA AAAACAAAGT GAACTCAAAG GGTTGCTATT ACGTTCAGCG
AAGACAGCCT TGATTGTTGG TGCCGATATT ACTGAGTTTC TATCCCTGTT TAATGCCCCA
CCAGAAAAAC TGCACCAGTG GCTGGTGTTC GCCAACACCA TTTTCAATCG ACTGGAAGAT
TTACCCGTGC CAACCATTTC AGCAATTAAT GGATACGCAC TAGGTGGAGG ATGTGAATGT
ATTTTGGCGA CGGATTTCCG TATCGCCTCC CCAGAAGCAC GTATCGGCCT CCCAGAAACC
AAGTTGGGCA TCATGCCGGG CTTCGGTGGT TCGGTCCGTT TACCACGCCT GCTAGGCGCT
GATAGTGCAC TTGAGATTAT TGCCACAGGT AAAGATGTTA CTGCCAACGA TGCACTAAAG
ATTGGGCTGG TTGATGCAGT TGTCGACCCT GAGAAACTGG TCGGTTCAGC CTTAACTATG
CTGAAACAAG CTATTGACGG TAAGCTCGAT TGGCAGGCAG CACGCCGCCC AAAACTGGAA
CCCCTAAAAC TTAATCCTAC CGAAGCGGCT ATGTGTTTTA CCATTGCTAA AGGCAGAGTC
ATGCAAGTCG CCGGGAAACA CTATCCCGCA CCATTGACTG CAGTAAAAAC TATTGAAGCC
GCCGCAAAAT TTGGTCGTAC CGAAGCGCTG AACTTGGAAA CCAACAGTTT TGTCCCTTTA
GCGGGTTCCA ATGAAGCTCG CGCTTTGGTG GGGATTTTTC TTAACGACCA GTATGTAAAA
GCGCAAGCCA AAAAACTGTC CAAAGGCGTC GCTGCACCAA AACTGGCTGC GGTTCTGGGC
GCAGGGATCA TGGGAGGTGG AATTGCCTAT CAGTCAGCGC TGAAAAGTGT GCCAGTCATT
ATGAAAGATA TTAATGAAAA CTCGCTGGAT CTTGGAATGA ATGAGGCCGC TAAATTACTG
AATAAACAGC TGGAACGCGG CAAAGTGGAT GGCCTTAAAA TGGCAAGTAT TCTAGCGACT
ATTCGACCAA CCTTGGATTA TGCAGGTATT GAACGAGCCC AAGTGATCGT CGAAGCTGTG
GTGGAGAACC CGAAGGTTAA AGCCGCTGTA CTTGCGGAAG TAGAAGCATT AATCGGTGAA
GATACCGTTT TAGCTTCCAA TACCTCGACG ATTCCTATTG ATCAGTTGGC TAAATCACTC
AAACGCCCTG AAAATTTCTG CGGTATGCAC TTCTTCAATC CAGTACACCG GATGCCACTG
GTTGAAATTA TTCGTGGGGC AAAAACCTCA GATAAAACCC TTGCGGCAGT AGTCGCTTAC
GCTACACAAA TGGGGAAAAC CCCAATTGTT GTCAATGATT GCCCTGGTTT CTTCGTTAAC
CGCGTCTTAT TCCCGTATCT CGCAGGCTTT GGCATGTTAG TCAGAGACGG TGGGGATTTC
CACCAAATTG ATAAAGTGAT GGAAAAACAG TTTGGCTGGC CGATGGGGCC CGCTTATCTA
TTAGATGTCG TCGGTATTGA TACTGCCCAT CATGCACAAG CGGTGATGGC TGCCGGTTTC
CCTGAGCGAA TGAACAAGGA TTACCGTGAT GCGGTTGATG TGATGTTTGA TAACCAACGA
TTTGGGCAAA AGAATGGTCA GGGGTTTTAC CGCTATACGC AAGATGCAAA GGGTAAGCCA
CGTAAAGAAA ATGACGAACA AGTGGATAAA TTACTGGCAG AAATCAGCCA ACCTCTCCAA
GAATTCAGCG ATGAAGACAT TATTGCCCGC ACCATGATCC CAATGATCAA TGAAGTCGTC
CGCTGCCTGG AAGAAGGTAT TATTGCCAGC GCAGCCGAGG GTGACATGGC GCTGGTTTAT
GGCCTTGGCT TCCCTCCATT CCACGGAGGA GTCTTCCGTT ACCTTGATAC GCTCGGTAGC
GCAAATTATG TCGAAATGGC TCAACGCTAT GCCCACCTTG GTGCGTTATA TCACGTTCCT
GCGGGGCTAC GAGCTAAAGC TGAACATAAC GAAAGTTATT ATCCTGTGTC AGCAGCGCTG
CTTGATGTTT CTACCAATCA ACCAGCATGA
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| Protein sequence | MLYQSETLQL HWLENGIAEL VFDAPGSVNK LDTKTVANLG EALNVLEKQS ELKGLLLRSA
KTALIVGADI TEFLSLFNAP PEKLHQWLVF ANTIFNRLED LPVPTISAIN GYALGGGCEC
ILATDFRIAS PEARIGLPET KLGIMPGFGG SVRLPRLLGA DSALEIIATG KDVTANDALK
IGLVDAVVDP EKLVGSALTM LKQAIDGKLD WQAARRPKLE PLKLNPTEAA MCFTIAKGRV
MQVAGKHYPA PLTAVKTIEA AAKFGRTEAL NLETNSFVPL AGSNEARALV GIFLNDQYVK
AQAKKLSKGV AAPKLAAVLG AGIMGGGIAY QSALKSVPVI MKDINENSLD LGMNEAAKLL
NKQLERGKVD GLKMASILAT IRPTLDYAGI ERAQVIVEAV VENPKVKAAV LAEVEALIGE
DTVLASNTST IPIDQLAKSL KRPENFCGMH FFNPVHRMPL VEIIRGAKTS DKTLAAVVAY
ATQMGKTPIV VNDCPGFFVN RVLFPYLAGF GMLVRDGGDF HQIDKVMEKQ FGWPMGPAYL
LDVVGIDTAH HAQAVMAAGF PERMNKDYRD AVDVMFDNQR FGQKNGQGFY RYTQDAKGKP
RKENDEQVDK LLAEISQPLQ EFSDEDIIAR TMIPMINEVV RCLEEGIIAS AAEGDMALVY
GLGFPPFHGG VFRYLDTLGS ANYVEMAQRY AHLGALYHVP AGLRAKAEHN ESYYPVSAAL
LDVSTNQPA
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