| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0280 |
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| Symbol | ubiD |
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| ID | 5388081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 312243 |
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| End bp | 313739 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640863246 |
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| Product | 3-octaprenyl-4-hydroxybenzoate decarboxylase |
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| Protein accession | YP_001399277 |
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| Protein GI | 153948611 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGCA TGAAATACCG TGACTTACGT GACTTCCTCT CATTACTGGA ACAGAGGGGG
GAACTTAAAC GCATTAGCCA GCCCATTGAT CCTTATTTGG AAATGACAGA AATTGCCGAT
CGCACGTTAC GTGCTGGTGG GCCTGCGTTA CTTTTTGAGA ACCCTAAAGG TTACAGCATG
CCCGTGTTGT GTAATCTGTT TGGCACCGCT AAGCGAGTCG CCATGGGGAT GGGGCAAGAA
GATGTCAGCG CCCTGCGAGA TGTTGGTAAA TTATTGGCCT TCCTGAAAGA ACCCGATCCC
CCAAAAGGTT TCCGTGACTT ATTTGATAAG CTGCCAAAAT TTAAGCAGGT ATTGAATATG
CCAACGAAAC GCTTGAACTC GGCCCCGTGT CAGGAGCAAG TTTGGCAAGG TGAGGATGTT
GATTTAAGTC GCATCCCTGT GATGCACTGC TGGCCAGAAG ATGCCGCACC ACTAGTCTCT
TGGGGGTTGA CTATTACACG TGGTCCCCAC AAAGAACGGC AGAATCTAGG CATCTATCGC
CAGCAGGTAT TGGGTAAAAA CAAATTAATT ATGCGTTGGC TATCGCATCG TGGTGGTGCG
CTGGATTATC AGGAGTGGTG TGAGGCACAC CCTGGTGAAC GTTTTCCGGT CGCTGTCGCC
TTGGGAGCAG ACCCTGCTAC GATCTTAGCC GCAGTGACCC CGGTACCAGA CACGCTGTCT
GAATATGCCT TTGCCGGCTT GTTACGCGGC CATAAAACGG AAGTGGTGAA GTGTCTTTCC
AATGACCTTG AAGTTCCTGC AAGTGCAGAA ATTGTATTGG AAGGATATAT CGAACAAGGT
GATATGGCTC CGGAAGGTCC TTATGGTGAT CATACGGGCT ATTACAATGA AATAGATAAT
TTCCCCGTGT TTACCGTCAC GCATATTACA CAGCGCCAAG ACGCAATTTA TCATTCAACC
TATACGGGCC GACCACCGGA TGAACCTGCG GTAATGGGGG TGGCACTGAA CGAAGTCTTT
GTACCTATTT TGCAAAAGCA ATTCCCGGAA ATTGTTGATT TCTACTTGCC ACCAGAAGGG
TGCTCATACC GGTTGGCGGT GGTAACCATC AAGAAACAAT ATGCAGGCCA TGCCAAACGC
GTGATGATGG GAGTATGGTC GTTTTTACGC CAGTTTATGT ATACCAAGTT TGTTATTGTT
TGTGATGACG ATATTAATGC TCGTGATTGG AATGATGTAA TTTGGGCGAT CACCACCCGG
ATGGACCCAT CCCGCGATAC GGTGTTAATT GAAAATACAC CGATAGATTA TTTGGATTTC
GCCTCACCGG TTTCCGGTTT GGGATCGAAA ATGGGGCTGG ATGCCACCAA CAAATGGCCA
GCAGAGACTC CGCGTGAATG GGGGCGTCCA ATTAAGATGG ACGAAGACGT CCGTGCCCGT
ATTGATGCTC TGTGGGATGA GCTGGCCATT TTCAGTGACA AAGACGCGAA ACGCTAA
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| Protein sequence | MISMKYRDLR DFLSLLEQRG ELKRISQPID PYLEMTEIAD RTLRAGGPAL LFENPKGYSM
PVLCNLFGTA KRVAMGMGQE DVSALRDVGK LLAFLKEPDP PKGFRDLFDK LPKFKQVLNM
PTKRLNSAPC QEQVWQGEDV DLSRIPVMHC WPEDAAPLVS WGLTITRGPH KERQNLGIYR
QQVLGKNKLI MRWLSHRGGA LDYQEWCEAH PGERFPVAVA LGADPATILA AVTPVPDTLS
EYAFAGLLRG HKTEVVKCLS NDLEVPASAE IVLEGYIEQG DMAPEGPYGD HTGYYNEIDN
FPVFTVTHIT QRQDAIYHST YTGRPPDEPA VMGVALNEVF VPILQKQFPE IVDFYLPPEG
CSYRLAVVTI KKQYAGHAKR VMMGVWSFLR QFMYTKFVIV CDDDINARDW NDVIWAITTR
MDPSRDTVLI ENTPIDYLDF ASPVSGLGSK MGLDATNKWP AETPREWGRP IKMDEDVRAR
IDALWDELAI FSDKDAKR
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