| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0277 |
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| Symbol | tatD |
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| ID | 5386201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 309578 |
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| End bp | 310360 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640863243 |
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| Product | DNase TatD |
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| Protein accession | YP_001399274 |
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| Protein GI | 153946831 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATA TTGGTGTTAA TTTAACCAGC GTACAGTTTG CAAAAGATTA TCATCAGGTA
GTCAACCGGG CAAAAGAGGC TGGGGTTCTC GGTATCCTGA TTACCGGTAC TGATGCAGAT
GAAAGCTTGG CAGCACAGAT TTTGGCCGCT GAATACCCTG GCTATTGTTG GTCGACTACA
GGCGTTCATC CTCACCATGC GAGCAGTTGG CAAGATAGTG TCGAGCAGAA AATTCGAACC
TTGGCAGCCA CTGCCCCCGT CGTCGCTATT GGTGAGTGCG GGTTAGACTT TAACCGTAAC
TTTTCCACCC CAGCGCAACA AGAAGCCGCA TTTACCGCTC AATTAGCTCT GGCTGCCGAA
CTTTCGCTGC CGGTATTTTT GCATTGTCGT GATGCCCATG AGCGTTTTAT TGATTTGCTG
GTTCCTTGGC TAGATAAAAT ACCGGCGGCT GTTGTGCATT GTTTCACGGG TAACAGTGAT
GAGTTAGATG CCTGTTTAGC ATTGGGTTTA TCTATAGGTA TCACGGGTTG GGTTTGCGAT
GAGCGTCGTG GCCTTGATCT TAGAGCTTTG CTCCCGCGTA TTCCTGTTCA GCAGCTATTG
TTGGAAACTG ATGCTCCCTA TTTATTGCCA AGGGATTTGA ATCCTAAACC TGCATCACGT
CGCAATGAAC CCTGTTTTCT GCCCCATATC GTCCAGCAGG TTGCAGCCTG GCGACAAGAA
GACCCTAATT GGCTAGGACA GAAAACTGAT GAAAACGCCC GCCGGGTTTT CCGGCTGGTT
TGA
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| Protein sequence | MFDIGVNLTS VQFAKDYHQV VNRAKEAGVL GILITGTDAD ESLAAQILAA EYPGYCWSTT
GVHPHHASSW QDSVEQKIRT LAATAPVVAI GECGLDFNRN FSTPAQQEAA FTAQLALAAE
LSLPVFLHCR DAHERFIDLL VPWLDKIPAA VVHCFTGNSD ELDACLALGL SIGITGWVCD
ERRGLDLRAL LPRIPVQQLL LETDAPYLLP RDLNPKPASR RNEPCFLPHI VQQVAAWRQE
DPNWLGQKTD ENARRVFRLV
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