Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0273 |
Symbol | ubiB |
ID | 5384625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 306000 |
End bp | 307631 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640863239 |
Product | putative ubiquinone biosynthesis protein UbiB |
Protein accession | YP_001399270 |
Protein GI | 153950003 |
COG category | [R] General function prediction only |
COG ID | [COG0661] Predicted unusual protein kinase |
TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCAG GAGAACTTCG GCGCCTGTAT TTAATTATTC GGGTCTTCTT GAGTTATGGG TTGGATGAAT TAATTCCGAA TATACGTCTG ACGCTACCAC TACGGGTTGG GCGTCATCTG TTTTTTTGGT TATCTAACCG GCATAAAGAT AAGTCATTAG GTGAGCGTTT ACGTCTTGCT TTGCAGGAGT TGGGACCTGT CTGGATCAAA TTCGGCCAAA TGATGTCCAC GCGCCGCGAC TTGTTTCCTC CAAATATTGC CGATCAATTA GCTCTGTTAC AAGATCGGGT CGCTTCTTTT GATGGTGCGC TAGCGCGTAA GCATATTGAG ATTGCGATGG GGGGGGCGTT AGAAACATGG TTTGATGATT TTGATTCGCA AGCGCTAGCT TCAGCCTCCA TTGCCCAAGT ACATACTGCA CGCTTAAAAG AGAATGGTAA GGAAGTCGTA CTTAAGGTTA TTCGCCCTGA TATCCTGCCG ATTATTAAAG CTGATGTACG TTTAATGTAT CGTTTAGCTG GCTGGGTACC AAAGCTTTTA CCTGATGGTC GCAGATTACG CCCGCGTGAA GTTGTTCGTG AATATGAAAA AACGCTGCTT GATGAACTGA ATCTTCTGCG TGAAGCAGCG AATGCTATTC AACTGCGTCG TAATTTTGAA GACAGTCCAA TGCTCTACAT TCCCGAGGTG TACTCGGACT ATTGTCGTGA AAGCGTATTA GTCATGGAGC GGATTTACGG TATCCCGGTA TCTGATATTG CTGCTTTAGA AGACCAAGGT ACCAATATGA AGTTACTGGC AGAGCGCGGG GTGCAAGTCT TTTTCACCCA GGTTTTCCGT GACAGCTTCT TCCACGCAGA TATGCATCCG GGGAATATTT TTGTCAGCTA TGAACATCCT CATGACCCGC TTTATATTGG TATTGATTGC GGTATTGTTG GCTCACTGAA TAAAGCCGAT AAACGTTATC TGGCTGAGAA CTTTATTGCT TTCTTTAACC GCGATTACCG CCGGGTTGCT GAGCTACATG TGGACTCTGG CTGGGTACCT CGAGATACCA ATGTCGAAGA TTTTGAATTC GCCATCCGTA CCGTTTGTGA ACCTATCTTT GAAAAACCAC TGGCAGAAAT ATCATTTGGG CATGTGTTGC TGAATCTCTT CAACACTGCG CGCCGTTTTA ATATGGAAGT ACAGCCACAG TTAGTTCTAT TACAGAAAAC CTTGTTATAC GTTGAAGGGC TAGGGCGTCA GCTTTATCCT CAGCTTGATC TCTGGACTAC CGCTAAGCCG TTTCTGGAAA GTTGGCTGCG GGACCAGGTC GGTCTACCTG CCGTAATTCG TGCATTAAAA GAGAAAGCCC CTTTCTGGGC TGAAAAATTC CCTGAGCTAC CAGAACTGGT TTACGACAGC TTACAGCAGC ATAAATTATT ACAACAAAGT GTGGAGAAGC TCACTATACA GATACAAGGT CAGCAACAAC GTCAGGGGCA GTCACGGTAT TTGTTCGGTG TTGGCGCTAC ACTATTAGTG AGCGGTACTA TCTTATTCTT GGCCGATGCA ACCGAAGTCT CTACAGGGTT CATCGTTGCC GGTGCATTGG CTTGGTTTAT CGGTTGGCGA CGTACCTGCT AA
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Protein sequence | MTPGELRRLY LIIRVFLSYG LDELIPNIRL TLPLRVGRHL FFWLSNRHKD KSLGERLRLA LQELGPVWIK FGQMMSTRRD LFPPNIADQL ALLQDRVASF DGALARKHIE IAMGGALETW FDDFDSQALA SASIAQVHTA RLKENGKEVV LKVIRPDILP IIKADVRLMY RLAGWVPKLL PDGRRLRPRE VVREYEKTLL DELNLLREAA NAIQLRRNFE DSPMLYIPEV YSDYCRESVL VMERIYGIPV SDIAALEDQG TNMKLLAERG VQVFFTQVFR DSFFHADMHP GNIFVSYEHP HDPLYIGIDC GIVGSLNKAD KRYLAENFIA FFNRDYRRVA ELHVDSGWVP RDTNVEDFEF AIRTVCEPIF EKPLAEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP QLDLWTTAKP FLESWLRDQV GLPAVIRALK EKAPFWAEKF PELPELVYDS LQQHKLLQQS VEKLTIQIQG QQQRQGQSRY LFGVGATLLV SGTILFLADA TEVSTGFIVA GALAWFIGWR RTC
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