Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0258 |
Symbol | ugpE |
ID | 5386628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 288250 |
End bp | 289095 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640863224 |
Product | glycerol-3-phosphate transporter membrane protein |
Protein accession | YP_001399255 |
Protein GI | 153949205 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAGA ATCGTCGTGG ATTGGATATC TTTTGTCACA TCATGCTGAT TATCGGGGTG CTATTGATCC TGTTCCCACT GTATGTGGCG TTCGTTGCGG CTTCATTAGA TGACAGCCAG GTTTTTCAGG CGCCCATGAC GCTGATCCCT GGCCCGCATT TGTGGCAAAA CATCAGCCAT ATCTGGCATG CCGGCGTGGG CAATAACAGC ACACCTTTCG GGTTGATGCT GTTGAACAGT TTTGTTATGG CTTTTGCCAT TACTGTCGGC AAAATCACTG TCTCAATATT GTCTGCTTAT GCCATCGTTT ACTTCCGTTT CCCACTGCGG AATCTGTTTT TCTGGCTAAT CTTCCTCACG CTGATGCTAC CGGTGGAAGT GCGTATTTTC CCTACCATTG AGGTGATTGC CAACCTGAAC CTGCTAGACA GCTATACCGG TTTAACATTG CCGCTGATGG CCTCTGCCAC GGCGACGTTC TTATTCCGCC AGTTCTTTAT GACGTTACCG GATGAGCTAT TGGAAGCCGC CCGTATTGAC GGCGCCGGTG CCATGCGTTT CTTCTGGGAC ATTGTATTAC CGCTGTCAAA AACCAATCTC GCAGCATTAT TTGTTATTAC CTTTATTTAT GGCTGGAACC AATACCTTTG GCCGATCTTA ATCACCAGTG ATGCCTCAAT GGGCACGGCA GTAGCGGGGA TAAGAAGCAT GATTTCAACC TCGGGCGCAC CAACCCAGTG GAATCAGGTT ATGGCGGCGA TGATTTTGAC TTTAATTCCA CCGGTCGTGG TGGTTCTTTT GATGCAGCGT TGGTTTGTAC GCGGCTTGGT AGACAGTGAG AAGTAA
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Protein sequence | MIENRRGLDI FCHIMLIIGV LLILFPLYVA FVAASLDDSQ VFQAPMTLIP GPHLWQNISH IWHAGVGNNS TPFGLMLLNS FVMAFAITVG KITVSILSAY AIVYFRFPLR NLFFWLIFLT LMLPVEVRIF PTIEVIANLN LLDSYTGLTL PLMASATATF LFRQFFMTLP DELLEAARID GAGAMRFFWD IVLPLSKTNL AALFVITFIY GWNQYLWPIL ITSDASMGTA VAGIRSMIST SGAPTQWNQV MAAMILTLIP PVVVVLLMQR WFVRGLVDSE K
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