| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0254 |
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| Symbol | |
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| ID | 5384830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 282121 |
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| End bp | 284436 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640863220 |
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| Product | hypothetical protein |
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| Protein accession | YP_001399251 |
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| Protein GI | 153947183 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTATT ATTCAAAAAT TAATCATAGC TTACTTTTTA CTTTAGCCTT ATTCACACTA
AAGCTCGCTC ATGCAGAAGC AGTTAAAATA GAGTATTTAG TGCCAATGGG GTTTTCCGCG
GCTGAAGAGA ACAACTCACT TCAGTTATTA GGGGTATTAG ACAGTAAGAC ATTGCCCAGC
CCTATTACCT TCTCAGAAGA AAAACAACAA CTGCAATTTA ATCAACAGAA CTATCGGCAT
AATAATATTA GTGAAGAATC TATTATTTTA TTGGGAGAGA TATTATCTCA AATACCGTAT
TTACAGTGTA AAACCGGCTG TGATTATACT TTATCGGGTC ACCGCGTGGC GTTAGATAAA
GTGAATAACA CATTGACGAT CACCAATAAT AATAATCGTT ATCTGATGCC AACCACGACA
TGGGGGTTGG TCAGCAATCA ATCTCTCGAT TTGCGAATGA CAGCAGCCCA CTATCGGGCG
ATGTCAGTCC GTGGTCAAAG TTACATCGGC TTGCCATGGC AATCTTATGG CTTTGCATCT
TGGTTTTATA ACGCGATTCA GTCACAGAAT ACGCTGCAAT CACAGAGCAC CTATCAGCCC
GTTAATCGCC CTCAATATCA GCGCCTAACC CAAAAAGGGA TCGGCAGTTG GTATTTGCAA
AAGAACTTCT CGGCACTCTA TTTACGCACC GGTCGGCAAA ACAACCTGGA TAACAACGCA
GGTAGCGTTC ACACCCTGAT CAACCCTGCG TTGGACCAAT TTGTAACACT CGGTAGTCAA
AGCTATCTGG TCATCGATAA GCCCTCCACT GGCAGTATCG TGCTCTATGC CGCTCAAGAT
GGTGACTACG AAATATACCG TGATAATCAG CTCATTCGCC GCATCCCCGC TCAATTGGGT
CGCAACGAGA TAGATTACAG CCAACTACCA GGGGGCTATT ACAACGTTGA GATTCGTTTA
GTTGATCGTC TTGGGCGGAT CGTCAGCCAG GAAAACCAAA CCATCAGCAA TATTGGCAAT
CAGACCAATA ATGGTTGGTT TCTGACAATG GGTAAAGGGC CAGCCAAGGG TAAAAAAACG
CCCCGTTTAG TCCAGTTTGG ACGCAGTAGG GTGATAGAAA GCGTACAAAC CAATATCACG
CTACTCAAAG ATGATGCCCA TCACTGGGCC GTGGAAGCGA ACGTCTCACG CCCTTTAAGC
CTCAATAAGG TGAATATCAC CCCAACAGGG GGCTTGATGT CAGGAGAGAA ACGCAGTGGA
GGTTACGTTC GCTTAAATGG CGGCAACAAT ACACTGGGTT ACTTTTCATT AGCTCGCTAT
CAGTCACCTT ATGTCTCGCG ATACGCACCT GACTCTGGCA GTACCTCAGG CTCCTATACC
CGGCGTATTG GGCCAACCCA ACTAAGTTAT CAATTCAATC AATACCGCAA TAACCGGCAA
CACCGTATCC AAAGTGGTTG GGACTGGCAA TTACCACAAT TTAACCTCGC GTTATCCCTT
GGGCTGCAAA ATGGTGGGCA ATGGAACAGC CACAATAATT ACGGCGTATT CCTGAACACC
ACCCTGTCCT TCGGCCAAAG TAACGCCAGC ATCAATACGG CTTATACCCA ACAACAGTTG
AACACCAGCG CCAGTTACCA GAAAGAGTTT ATTGATAACT ATGGGGCCAG CACTTTGGGT
GTCAGTGGTA GTGCCAGCGG GAAACTAAAT AGCGTCGGCG GTTTTGCTAA ACGCAGCGGG
AGCCGGGGGG ATATCTCTGG CCGGGTAGGC ATTGATAACC AGATAACCAA CGGGGGGATT
AGCTATAACG GCATGTTGGC ACTCAGCTCA CAGGGGGTTG CCTTGGGGCG CAGCAGTTAT
AGCGGAGCGG CACTCTTGAT CAAAGCCCCC GCTCTGGGCG GTACCCCCTA TAGTTTTCAT
GTGGAGGATA GCCCAATAAC CGGTGGTGGC ACCTATGCGA TACCGGTCCC CCGCTACCAA
GACCGTTTCT TTGTCCGTAC TCACACCGAC CGCAGTGATA TGGATATGAA TATTCAACTG
CCGGTCAACA TCGTACGCGC TCACCCTGGG CAAGTTTTTT CAGGCGAAGC TGACATCACA
TTGAACCTGC TATACAGCGG TTTTCTCAAA AATGCACAAG GGCTACCGGT GAGCGGGGTG
ATTGAGGAGA CGGGTGATAC CGCTTATCCC AATGGGCTGT TTTCCATTAA CGCCCAAAAT
AGGCTGCAAG CGATAACCGT CCAAGGCCCT TCTGGCCGTT ACCGCTGTGA TATGCATTCG
CAACCTACTC ATATTTACCT TTGCCACGCC GATTAA
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| Protein sequence | MAYYSKINHS LLFTLALFTL KLAHAEAVKI EYLVPMGFSA AEENNSLQLL GVLDSKTLPS
PITFSEEKQQ LQFNQQNYRH NNISEESIIL LGEILSQIPY LQCKTGCDYT LSGHRVALDK
VNNTLTITNN NNRYLMPTTT WGLVSNQSLD LRMTAAHYRA MSVRGQSYIG LPWQSYGFAS
WFYNAIQSQN TLQSQSTYQP VNRPQYQRLT QKGIGSWYLQ KNFSALYLRT GRQNNLDNNA
GSVHTLINPA LDQFVTLGSQ SYLVIDKPST GSIVLYAAQD GDYEIYRDNQ LIRRIPAQLG
RNEIDYSQLP GGYYNVEIRL VDRLGRIVSQ ENQTISNIGN QTNNGWFLTM GKGPAKGKKT
PRLVQFGRSR VIESVQTNIT LLKDDAHHWA VEANVSRPLS LNKVNITPTG GLMSGEKRSG
GYVRLNGGNN TLGYFSLARY QSPYVSRYAP DSGSTSGSYT RRIGPTQLSY QFNQYRNNRQ
HRIQSGWDWQ LPQFNLALSL GLQNGGQWNS HNNYGVFLNT TLSFGQSNAS INTAYTQQQL
NTSASYQKEF IDNYGASTLG VSGSASGKLN SVGGFAKRSG SRGDISGRVG IDNQITNGGI
SYNGMLALSS QGVALGRSSY SGAALLIKAP ALGGTPYSFH VEDSPITGGG TYAIPVPRYQ
DRFFVRTHTD RSDMDMNIQL PVNIVRAHPG QVFSGEADIT LNLLYSGFLK NAQGLPVSGV
IEETGDTAYP NGLFSINAQN RLQAITVQGP SGRYRCDMHS QPTHIYLCHA D
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