| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0242 |
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| Symbol | rpoH |
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| ID | 5387297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 271277 |
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| End bp | 272134 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640863208 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001399239 |
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| Protein GI | 153947554 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.330072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAAAG AAATGCAAAC TTTAGCCTTA GTGCCCCAGG GTAGTCTGGA AGCCTATATT
CGGGCTGCCA ACGCCTATCC AATGCTGACT GCAGAGGAAG AACGGGAGCT GGCTGAACGG
CTGCATTACC AGGGCGATCT GGGAGCGGCT AAACAGCTTA TCCTGTCTCA CCTGCGCTTT
GTTGCTCATG TTGCCCGCAA CTATTCCGGG TACGGTTTGC CACAGGCTGA CCTTATTCAG
GAAGGTAATA TTGGCTTGAT GAAAGCGGTT CGCCGTTTTA ACCCTGAAGT CGGGGTGCGT
CTGGTGTCCT TCGCTGTGCA CTGGATCAAA GCAGAAATTC ATGAATATGT TCTGCGTAAC
TGGCGGATTG TGAAAGTCGC AACTACCAAA GCTCAGCGTA AGCTGTTCTT CAACCTGCGT
AAAACCAAGC AGCGCCTGGG CTGGTTTAAT CAGGATGAAG TAGAATTGGT CGCCAAAGAG
CTTGGCGTAA CCAGTAAAGA CGTTCGCGAG ATGGAGTCAC GTATGTCCGC TCAGGATATG
ACGTTCGATC CTTCTCCTGA TGACGAAGCA CGTGACGGCC AATTCATGGC TCCAGTCCTG
TATTTGCAGG ATAAAACCTC TGATTTTGCT GATGGCATCG AAGAGGATAA CTGGGATACC
CACGCGGCAG ATAAACTGTC TTATGCGTTG GAAGGGTTGG ACGAGCGGAG CCAACATATT
ATTCGCGCCC GTTGGCTGGA CGATGAGAAC AAGTCCACCT TACAAGAACT GGCCGATCAG
TACGGTGTGT CTGCTGAACG TGTACGTCAG CTTGAAAAGA ACGCGATGAA AAAATTGCGT
ATGGCGATTG AAGCCTAA
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| Protein sequence | MTKEMQTLAL VPQGSLEAYI RAANAYPMLT AEEERELAER LHYQGDLGAA KQLILSHLRF
VAHVARNYSG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVELVAKE LGVTSKDVRE MESRMSAQDM
TFDPSPDDEA RDGQFMAPVL YLQDKTSDFA DGIEEDNWDT HAADKLSYAL EGLDERSQHI
IRARWLDDEN KSTLQELADQ YGVSAERVRQ LEKNAMKKLR MAIEA
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