Gene YpsIP31758_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0234 
Symbol 
ID5387534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp264464 
End bp265090 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content51% 
IMG OID640863200 
Producthypothetical protein 
Protein accessionYP_001399231 
Protein GI153947639 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.674365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGC CATTCCTTGC TGTATTTTTT TCTGGTTGGT TGTTTGTCGA TGCCACTTAT 
CGTGGCCCCC GCTGGCAGCG TTGGGTATTC AAACCCGTCA CCTTGTTACT CTTACTGTTA 
CTGGCCTGGC AAGCACCTGC TCTTGGTCCT GCAGGTTATC TGATTGTCTT AGGATTACTG 
GCAACACTGC TTGCCGATGC CTTATTACTG CTACCCAGTG AGCGCTTACT TTATGCTTTA 
GGGGCATTCT TCCTATCCCA CTTGCTGTAT ACCATCAGTT TTGCCAGTCA GATGACCCTG 
ACGCTATTCT GGCCATTGCC TCTGGTGTTG ATCGTGGTTG GCGCTCTGCT GTTAGCCGCT 
CTCTGGACAC AGCTACAAGA TATGCGCTGG CCAGTCGTCG CCTTTATCGG TATGACCTTG 
CTAATGGTTT GGATGGCGGG TGAACAGTAC TTTGCCCGTA GCACTGATTT GGGCTTCTCG 
TTACTGGCGG GTAGTGTTCT TCTCCTGCTA TCACATGCTG TCTGGTTGCT GAATCGCTAC 
CGTTTCTCTT TCCGCGCGTC AGATGCCATC ACTGCCGGGT GCTATTTTAT CGGGCACTTT 
TTGATTGTCA GGTCGCTGTA TCTGTAG
 
Protein sequence
MSWPFLAVFF SGWLFVDATY RGPRWQRWVF KPVTLLLLLL LAWQAPALGP AGYLIVLGLL 
ATLLADALLL LPSERLLYAL GAFFLSHLLY TISFASQMTL TLFWPLPLVL IVVGALLLAA 
LWTQLQDMRW PVVAFIGMTL LMVWMAGEQY FARSTDLGFS LLAGSVLLLL SHAVWLLNRY 
RFSFRASDAI TAGCYFIGHF LIVRSLYL