Gene YpsIP31758_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_0194 
Symbol 
ID5385993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp219639 
End bp221030 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content50% 
IMG OID640863156 
Productputative transport protein YifK 
Protein accessionYP_001399191 
Protein GI153949165 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000145186 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACA ACGCAGAGAA AAAAGGATTA CACCGTGGGC TGGAAGCTCG GCATATCGAA 
CTGATAGCGT TGGGCGGTAC CATTGGTGTC GGGTTATTTA TGGGGTCAGC AAGCACGTTG
AAATGGGCAG GGCCGTCAGT ATTACTGGCT TATATCATTG CGGGCTTATT TGTATTCTTC
ATTATGCGCG CAATGGGGGA AATGCTGTAT CTGGAGCCCG TGGCTGGATC CTTCGCAGTC
TATGCGCATA AGTATCTCAG TCCCTATTTT GGCTATCTGA CGGCTTGGGG CTACTGGTTT
ATGTGGATTG CGGTGGGGAT ATCTGAAATT ACCGCCATTG GCGTCTATGT TCAGTTTTGG
TTCCCAGAAA TCCCGCAGTG GCTGCCGGCT ATCGCTGGGG TGGCGATTGT GGCATTAGCG
AATCTGGCCG CGGTCAAATT GTATGGCGAG CTAGAGTTTT GGTTTGCCAT GATCAAGGTC
ACGACGATCG TTGTGATGAT TTTGGTTGGC TTAGGCGTGA TATTTTTTGG CTTCGGTAAT
CACGGCCAGC CGATTGGCTT CGATAACCTG ACCGCCCATG GCGGTTTCTT TGCCGGGGGG
TGGAAAGGCT TCCTGTTTGC GCTGTGTATT GTGGTCGCGT CTTACCAAGG TGTTGAACTG
GTCGGTATTA CGGCGGGAGA AGCCAGAAAT CCACAGGTGA CGTTAAGAAG AGCGATCAAC
AACATCTTAT GGCGAATTTT GATTTTCTAC GTCGGTGCAA TATTTGTCAT TGTCACCATT
TTTCCCTGGA ATGGGATTGG TACAGAGGGT AGCCCCTTCG TACTGACCTT CGCCAAAATA
GGAATAGTGG CCGCGGCGGG TATTATTAAC TTCGTGATAC TGACCGCCGC TCTCTCAGGT
TGTAACAGTG GTATGTATAG CGGCGGGCGT ATGTTGTATG CCTTGGCAAA AAATCGTCAG
CTACCGGCCG GCCTGACCAA ACTGTCGGCT AGCGGTGTAC CGGTGTACTG CATTGCGATC
ACCATCCTGT GTCTACTGGT GGGGTCGAGC CTGAATTACA TTATTCCCAA CCCGCAGCAA
GTGTTTGTTT ATGTCTACAG TGCCAGCGTG TTACCTGGCA TGGTGCCGTG GTTTGTGGTC
TTGGTCTGTC AGTTACGTTT TCGGCAGGTA CATAAAGCTG CCCTACAGCA GCACCCGTTT
AAATCTATCC TATTCCCCTA TGTGAACTAC CTCACCATCG CATTCCTGAT TTGTGTATTA
GTGGGAATGG GGATAAACCC AGATACTCGC TTATCATTAC TGGTTGGGGC AATTTTTCTG
GCATTAGTGA CGGGATGCTA TTTTGTGCTG GGGATGCATA AACCCAAGGC CATGGAAGCG
GAACGCCTAT AA
 
Protein sequence
MADNAEKKGL HRGLEARHIE LIALGGTIGV GLFMGSASTL KWAGPSVLLA YIIAGLFVFF 
IMRAMGEMLY LEPVAGSFAV YAHKYLSPYF GYLTAWGYWF MWIAVGISEI TAIGVYVQFW
FPEIPQWLPA IAGVAIVALA NLAAVKLYGE LEFWFAMIKV TTIVVMILVG LGVIFFGFGN
HGQPIGFDNL TAHGGFFAGG WKGFLFALCI VVASYQGVEL VGITAGEARN PQVTLRRAIN
NILWRILIFY VGAIFVIVTI FPWNGIGTEG SPFVLTFAKI GIVAAAGIIN FVILTAALSG
CNSGMYSGGR MLYALAKNRQ LPAGLTKLSA SGVPVYCIAI TILCLLVGSS LNYIIPNPQQ
VFVYVYSASV LPGMVPWFVV LVCQLRFRQV HKAALQQHPF KSILFPYVNY LTIAFLICVL
VGMGINPDTR LSLLVGAIFL ALVTGCYFVL GMHKPKAMEA ERL