Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0188 |
Symbol | wecD |
ID | 5385164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 212755 |
End bp | 213492 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640863150 |
Product | TDP-fucosamine acetyltransferase |
Protein accession | YP_001399185 |
Protein GI | 153950869 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | [TIGR02382] TDP-D-fucosamine acetyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTCC ACGCCAGTAT TGAGCCACTG GGCTGGGAAA GTGAATTTTT CCAGCGCCAA AGTGCAAAAT TGATTTTTTC CGACTCAGCC CCGCCACTTA ACCCGGCTGA GTTGGCTGCT TTTACTCTCG TTCAAGCTAA AGTACCTACC CATCGCCTTG ATCTTATTGA TGCCCTGAGC CAACTTGATT TTCATTTGGT TGAAGGGGAA ATTGATCTGT CGCTGGTCGT GGGTGAAAAA GAAGGTATTG GCACGGAAAA TGCTACATCA GAACCCAATA TGGGGGCCTA CTCGCTACGG GTTGCCACCG AGGCAGATAT TCCGCAGTTG CGCCGTGTTG CTGCCAGTGC TTTTGCCTTA AGCCGCTTTC GTGCGCCTTG GTATGACGCA CAGGACAGTG GGCGATTTTA TGCTTTGTGG GTTGAAAAGG CGGTGCTGGG AACCTTTGAT CACCAATGTT TATTGGTGCT CGACCCTACG GATCAACCCG TCGGGTTTGT GACGTTGCGT GACTTGCAAG ACGGGAGTGC GCGTATTGGC CTGTTGGCCG TATTCCCCGG TGCACAGAGT AAAGGTATAG GGTTAAGATT AATGTCGGCG GCGAAGCAGT GGTGCCAGCA TCATGGGTTA CACCGGTTAC GGGTAGCCAC ACAAATGAGC AATATTGCTG CTTTACGTCT CTATATTCGT AGTGGTGCCT CCATTGAGAG TACCGCGTAT TGGTTATGCA GGGGATGA
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Protein sequence | MPVHASIEPL GWESEFFQRQ SAKLIFSDSA PPLNPAELAA FTLVQAKVPT HRLDLIDALS QLDFHLVEGE IDLSLVVGEK EGIGTENATS EPNMGAYSLR VATEADIPQL RRVAASAFAL SRFRAPWYDA QDSGRFYALW VEKAVLGTFD HQCLLVLDPT DQPVGFVTLR DLQDGSARIG LLAVFPGAQS KGIGLRLMSA AKQWCQHHGL HRLRVATQMS NIAALRLYIR SGASIESTAY WLCRG
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