| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0186 |
|---|
| Symbol | rfbB |
|---|
| ID | 5388118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 210534 |
|---|
| End bp | 211601 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640863148 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_001399183 |
|---|
| Protein GI | 153949720 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGCGAA TTCTCGTCAC AGGCGGGGCC GGTTTTATCG GCTCTGCGGT GGTCAGGCAT
ATTATTGATG GCACCTCAGA TAGCGTGGTG GTGGTCGATA AACTCACCTA CGCCGGTAAT
CTGGAGTCGC TGTCAGTGGT TGCGGGCAGT GAGCGTTATG CTTTCGAACA AGTCGATATC
TGTGACCGCA GTGAGTTGGA TCGGGTTTTC GCACAGTATC AGCCGAATGT GGTGATGCAT
TTGGCTGCCG AGAGCCACGT TGACCGCTCA ATTGATGGCC CCGCCGCGTT TATCGAGACG
AACGTGGTTG GCACTTACAC CCTGTTGGAA GCTGCCCGTC ACTATTGGCA ACAACTGAGT
GTTGAAGCCA AGCAGGCGTT CCGCTTTCAC CATATCTCAA CGGATGAGGT GTATGGCGAT
TTACACGGCA CTGACGATTT GTTTACCGAA ACCACGCCGT ATGCGCCAAG CAGCCCATAT
TCGGCGTCTA AAGCGTCCAG TGACCATTTA GTCCGGGCTT GGTTGCGTAC TTATGGTTTA
CCGACTTTGG TGACTAATTG TTCAAATAAT TACGGCCCGT ATCACTTCCC AGAAAAGCTG
ATCCCGCTGG TTATTTTAAA TGCGTTGGCG GGTAAGCCGC TGCCTGTTTA TGGCAATGGT
GCTCAGGTCC GCGACTGGTT GTATGTAGAA GACCACGCCA GAGCGTTGTA TCAGGTGGTT
ACTGAGGGTG TGGTGGGTGA AACCTACAAT ATCGGCGGCC ATAATGAGCG CAAGAATATT
GAAGTAGTTG AAACCATTTG CGCGCTCTTG GATGAGTTGG TGCCAGCAAA ACCGGCGGGT
ATTGCACACT ACCGTGATTT GATTACCTAC GTAAAAGACC GGCCGGGTCA TGATATGCGC
TATGCCATTG ATGCTGGCAA GATTGAGCGG GAACTGGGTT GGCGTCCACA AGAAACCTTC
GAAAGCGGTA TCCGTAAAAC GGTCTTGTGG TATTTGAATA ATGAATCTTG GTGGCGTCGT
GTTCAGGATG GCTCATACGC CGGAGAGCGT TTGGGCTTGA GTGACTAA
|
|---|
| Protein sequence | MRRILVTGGA GFIGSAVVRH IIDGTSDSVV VVDKLTYAGN LESLSVVAGS ERYAFEQVDI
CDRSELDRVF AQYQPNVVMH LAAESHVDRS IDGPAAFIET NVVGTYTLLE AARHYWQQLS
VEAKQAFRFH HISTDEVYGD LHGTDDLFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL
PTLVTNCSNN YGPYHFPEKL IPLVILNALA GKPLPVYGNG AQVRDWLYVE DHARALYQVV
TEGVVGETYN IGGHNERKNI EVVETICALL DELVPAKPAG IAHYRDLITY VKDRPGHDMR
YAIDAGKIER ELGWRPQETF ESGIRKTVLW YLNNESWWRR VQDGSYAGER LGLSD
|
|---|
| |