| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0178 |
|---|
| Symbol | rhlB |
|---|
| ID | 5385760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 200957 |
|---|
| End bp | 202243 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640863140 |
|---|
| Product | ATP-dependent RNA helicase RhlB |
|---|
| Protein accession | YP_001399175 |
|---|
| Protein GI | 153947434 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA CACACTTGAC TGAACAGAAG TTTTCCGACT TCGCCCTGCA CCCGCTAGTT
GTTGAAGCCC TTGAAAACAA AGGGTTTCAG TATTGCACGC CGATTCAGGC GTTAGCATTG
CCACTCACCC TCTCTGGGCG TGATGTAGCA GGTCAGGCGC AAACCGGTAC AGGCAAGACG
CTGGCATTCT TGGCGTCTAC TTTCCATTAT TTGCTTTCTC ACCCAGCAGA AGAGGGTCGC
CAGACTAATC AACCACGCGC ATTAATTATG GCACCAACGC GCGAATTAGC CGTGCAAATT
CACTCCGATG CAGAATCACT TTCCCAGGTA ACCGGGCTGA AGTTAGGTCT GGCTTATGGT
GGGGATGGCT ACGATAAACA GCTTAAAGTG CTGGAAAGTG GCGTTGATAT CTTGATCGGT
ACAACAGGCC GTTTAATCGA TTACGCGAAA CAAAATTATA TTAACCTCGG TGCGATTCAA
GTCGTGGTAT TGGATGAAGC GGATCGCATG TACGATCTAG GCTTTATTAA AGATATCCGC
TGGCTGTTCC GCCGTATGCC TTCCGTTGAT AAACGTTTAA ATATGCTGTT TTCTGCCACT
CTCTCGTATC GGGTACGTGA ATTGGCATTC GAACAAATGA ATAATGCAGA ATATGTTGAA
GTGGAACCGT TACAAAAAAC CGGTCACCGC ATCAAAGAAG AGTTGTTCTA TCCTTCAAAT
GAAGAAAAAA TGCGTCTGTT ACAGACGTTA ATTGAAGAAG AATGGCCTGA TCGCTGTATT
ATTTTTGCTA ATACCAAACA CCGTTGTGAA GAGATCTGGG GGCATTTGGC TGCTGATGGT
CACCGCGTCG GTTTATTGAC GGGTGATGTT GCTCAGAAAA AACGCCTGCG TATTCTCGAA
GATTTCACCA AGGGCGATTT GGATATTCTG GTTGCCACCG ATGTTGCTGC CCGTGGTTTA
CACATTCCAT TAGTGACCCA CGTCTTCAAC TATGACCTGC CAGATGACTG TGAAGATTAC
GTTCACCGCA TTGGCCGTAC TGGCCGTGCT GGCGAAAGTG GTCACTCCAT CAGTCTGGCC
TGCGAAGAGT ATGCATTAAA CTTGCCAGCG ATTGAGACCT ATACGGGCCA TAGCATCCCG
GTAAGCAAAT ATAACAGTGA CGCGCTATTA ACTGATCTAC CAGCGCCTAA ACGCCTGGCC
CGTACCCGCA CCGGGAATGG CCCACGCCGT AATTCTGCCC CACGCCGCAG TGGAGCACCA
CGGAATAACC GTAAGCGACC AGGCTGA
|
|---|
| Protein sequence | MSKTHLTEQK FSDFALHPLV VEALENKGFQ YCTPIQALAL PLTLSGRDVA GQAQTGTGKT
LAFLASTFHY LLSHPAEEGR QTNQPRALIM APTRELAVQI HSDAESLSQV TGLKLGLAYG
GDGYDKQLKV LESGVDILIG TTGRLIDYAK QNYINLGAIQ VVVLDEADRM YDLGFIKDIR
WLFRRMPSVD KRLNMLFSAT LSYRVRELAF EQMNNAEYVE VEPLQKTGHR IKEELFYPSN
EEKMRLLQTL IEEEWPDRCI IFANTKHRCE EIWGHLAADG HRVGLLTGDV AQKKRLRILE
DFTKGDLDIL VATDVAARGL HIPLVTHVFN YDLPDDCEDY VHRIGRTGRA GESGHSISLA
CEEYALNLPA IETYTGHSIP VSKYNSDALL TDLPAPKRLA RTRTGNGPRR NSAPRRSGAP
RNNRKRPG
|
|---|
| |