Gene YpsIP31758_0175 details

Gene Information

• Locus tag: YpsIP31758_0175
• Symbol: rep
• ID: 5387648
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 197268
• End bp: 199289
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640863137
• Product: ATP-dependent DNA helicase Rep
• Protein accession: YP_001399172
• Protein GI: 153948778
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases
• TIGRFAM ID: [TIGR01074] ATP-dependent DNA helicase Rep

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATTAA ACCCCAGCCA ACAAGAAGCC GTCGAATTTG TCACTGGACC CTGTCTGGTG 
CTGGCCGGTG CGGGATCGGG TAAAACCCGA GTCATTACCA ACAAGATTGC CCACCTGATC 
CGTCAGTGTG GTTATCAGCC TAAGTATATT GCTGCCGTGA CCTTCACCAA TAAAGCAGCC 
CGCGAGATGA AAGAGCGTGT TGCTCAAACG CTGGGGCGCA AAGAAGCGCG GGGGTTGATG 
ATCGCGACTT TCCACACCTT GGGGTTGGAA ATCATCAAGA AAGAGTATGT GGCTCTGGGG 
ATGAAGTCGA ACTTCTCACT GTTCGATGCA CAGGATCAAA TGGGGTTATT GAAAGATCTG 
ACCCATAAGT GGCTGGAAGA TGACAAAACA TTGCTGCAGC AACTGGTGTC GGCGATCTCC 
AATTGGAAGA ATGATCTGCT GGATCCAGCC GCCGCCGCTG CGACAGCACG ATCCGAGCGT 
GATAAGTTAT TTGTCCATTG CTACGGCTTA TATGACGCCC ATTTGAAAGC CTGTAATGTG 
CTGGATTTTG ACGACCTTAT CTCGCTACCC ACCCTATTGT TGCAAAAAAA TCTGGAGGTC 
CGTGAGCGGT GGCAAAACCG TCTGCGTTAC CTGCTGGTTG ATGAATATCA GGATACCAAT 
ACCAGCCAGT ATCAAATGGT GAAATTGCTG GTGGGGAATC GGGCGCGTTT TACTGTCGTG 
GGTGATGACG ACCAATCTAT CTATTCATGG CGTGGTGCTC GGCCACAGAA CTTGGTCCTG 
CTAAATGAAG ATTTCCCTGC GCTACGGGTG ATTAAGCTGG AACAGAATTA CCGTTCTTCG 
GGGCGTATCT TGAAGGCGGC GAATATTTTG ATTGCCAACA ACCCACATGT TTTTGAAAAG 
AAACTTTTTT CTGAACTGAG CTATGGCGAT GAGTTGAAAG TGATTACCGC CAATAACGAA 
GATCATGAAG CGGAGCGGGT GGTCGGCGAG CTTATTGCAC ATCACTTTGT TAAAAAGACC 
CAATATAGCG ATTACGCCAT TTTGTATCGT GGGAATCACC AATCGCGGTT GTTTGAAAAA 
TTGCTGATGC AAAACCGTAT TCCTTATCGA ATTTCGGGTG GCGATTCATT TTTCTCTCGT 
CCAGAGATTA AGGATTTGTT GGCTTACCTA CGGGTATTGA CCAATCAGGA TGATGACAGT 
GCATTCTTAC GAATTGTGAA TACACCAAAG CGTGAGATTG GTGCGGCCAC CGTCCAAAAA 
TTGGGTGAAT GGGCTAATTT ACGCAATAAG AGCCTGTTTC GGGCCAGTTT TGATTTAGGG 
TTAGGCGAGC ACCTGAAGGG CCGTGGCCTG GAGTCATTGC AACGTTTTAC TCACTGGATG 
GATGGGATTA TTCGTTTGGT TGAGCGTGAA CCCGTGGCAG CAGTCCGGGA TTTGATCCAC 
GGTATTGATT ACGAAAGTTG GTTATTCGAA ACCGCGCCCA GCCCAAAAGC CGCTGAAATG 
CGTATGAAAA ACGTTAATTT ATTATTCAGT TGGATGACCG AAATGCTGGA AGGGTCGGAA 
CTGGATGAAC CGATGACGCT GACTCAGGTG GTAACGCGTT TTACCCTGCG TGACATGATG 
GAGCGAGGGG AGAGTGATGA AGAACTGGAT CAAGTGCAAT TAATGACGTT GCATGCGTCT 
AAGGGGCTGG AGTTCCCTTA TGTATTCTTG GTGGGGATGG AAGAGGGGTT ACTGCCGCAT 
CAAAGCAGCA TTGATGAAGA TAATGTGGAT GAAGAACGGC GGTTGGCTTA TGTGGGGATC 
ACCCGCGCCC AGCGTGAACT GTTCTTCACC CTGTGTAAAG AACGGCGGCA ATACGGCGAG 
TTGATTCGGC CAGAACCTAG CCGTTTTCTG ATGGAGTTGC CGCAGGACGA TTTAAACTGG 
GAAAACGAAC GTAAAGCCGT CAGCCCGGAA GAGCGTATGC AAAAAGGCCA GAGTCATCTG 
GCCAATCTTC GTGCTCAGTT AGCGAATGCG AAGAAACCGT AG 

 

Protein sequence

MRLNPSQQEA VEFVTGPCLV LAGAGSGKTR VITNKIAHLI RQCGYQPKYI AAVTFTNKAA 
REMKERVAQT LGRKEARGLM IATFHTLGLE IIKKEYVALG MKSNFSLFDA QDQMGLLKDL 
THKWLEDDKT LLQQLVSAIS NWKNDLLDPA AAAATARSER DKLFVHCYGL YDAHLKACNV 
LDFDDLISLP TLLLQKNLEV RERWQNRLRY LLVDEYQDTN TSQYQMVKLL VGNRARFTVV 
GDDDQSIYSW RGARPQNLVL LNEDFPALRV IKLEQNYRSS GRILKAANIL IANNPHVFEK 
KLFSELSYGD ELKVITANNE DHEAERVVGE LIAHHFVKKT QYSDYAILYR GNHQSRLFEK 
LLMQNRIPYR ISGGDSFFSR PEIKDLLAYL RVLTNQDDDS AFLRIVNTPK REIGAATVQK 
LGEWANLRNK SLFRASFDLG LGEHLKGRGL ESLQRFTHWM DGIIRLVERE PVAAVRDLIH 
GIDYESWLFE TAPSPKAAEM RMKNVNLLFS WMTEMLEGSE LDEPMTLTQV VTRFTLRDMM 
ERGESDEELD QVQLMTLHAS KGLEFPYVFL VGMEEGLLPH QSSIDEDNVD EERRLAYVGI 
TRAQRELFFT LCKERRQYGE LIRPEPSRFL MELPQDDLNW ENERKAVSPE ERMQKGQSHL 
ANLRAQLANA KKP