| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0170 |
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| Symbol | |
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| ID | 5388462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 193636 |
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| End bp | 194367 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640863132 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001399167 |
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| Protein GI | 153947436 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.978477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAGTA TATATGCCCG CCACTATCAT TATCTGTTTG TAACTTTATT AGTGGCTATG
AGTCTGTCTT TTGCTAATGC CAGTGTCGTG ATGACAGGGA GTCGCATTAT ATATCCTGCG
GCGGCAAGCG AGCACAGCAT ACAGTTAACC AATAATGACA ATTTCCCTAA TGCTGTTCAG
GTGTGGTTAG ACAGTGGCGA TGAAAAATCG ACACCAGAAA CAGGCAAAGC CCCCTTTATA
GTGACTCCAC CGTTCTTTCG TATTGAAGCA AATTCTGGCC AAACATTACG GTTAAAATAT
ACGGGAAGTG GCCTTCCTAC AGATAGGGAA TCCGTATTTT ATCTTAACTT TTTACAGATC
CCTCCCGTCA ATAAAGTAGA GAAAGATAAC AAGATGTTAG TGCTGTTGCG TAACCGCATT
AAAGTATTTT ATCGTCCCGA GAGTATTATC GGCCGTGTTG ACCAAGTCTC TACCGCATTG
ACTTTTAGTC TACGAAAACA AGGAACTAAC CTTGTTTTGA CAGGAAAAAA CCCAACTGGA
TTCTATGCCA CAATTGCCAG TGGTGAAATC GTGAGTGGGA GCATAAAACT TAAAGTAAAA
TCAAATATGA TCGCGCCTAT GTCTCAAGTT GAGTGGGTGA TCCCAAATGC ATCCGTACCC
TCGTCAGCAA CGATTAACTT TCTGATCATG AATGATTTCG GCGGGCAAGA TGCCGGTAGC
TATCGTATTT AG
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| Protein sequence | MLSIYARHYH YLFVTLLVAM SLSFANASVV MTGSRIIYPA AASEHSIQLT NNDNFPNAVQ
VWLDSGDEKS TPETGKAPFI VTPPFFRIEA NSGQTLRLKY TGSGLPTDRE SVFYLNFLQI
PPVNKVEKDN KMLVLLRNRI KVFYRPESII GRVDQVSTAL TFSLRKQGTN LVLTGKNPTG
FYATIASGEI VSGSIKLKVK SNMIAPMSQV EWVIPNASVP SSATINFLIM NDFGGQDAGS
YRI
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