| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_0167 |
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| Symbol | |
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| ID | 5388440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 188789 |
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| End bp | 189523 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640863129 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001399164 |
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| Protein GI | 153948870 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCT GTCGTGTACT GACTCTCCCT GCGCTGACGA TTGGCGTGCT GATAATGAGT
GCGCTGGCAA CGAGTGCAGT GGCAAGTGTG ATTGCAGAGA GAACACGTAT TGTCTTCAGT
GAAGGCAGTA CAGAAGAGTC ACTGCAACTG GTTAACAGCA ATAGCTACCC GGTAGCGGTA
CAAGTTTGGG TGGATGACGG CAATTTGATG GCGACGCCTG ATAAGGCTGT TTCACCCATA
TTGGTGTTAC CTCCGGTATT CCGGTTACAA CCTCAAGCAC AGCGTAGCCT GCGGTTGATC
TTATCTGGTG GGAGTAAATT ACCTGCGGAT AGGGAATCTG CATTCTGGCT AAATATTTAC
GAAATCCCGC CTAAGGCAAC CCCCAAATCC GGTGATGAAT CTTTTGTTAC GCTGGCCCTA
CGGATGCAAT ATAAAGTCTT TTACCGCCCT AAAAACCTAC CCGCGCCAGG AGATATTTTA
GGCAAGGCAT TAACCTTTAG CCTCGAGCGT AACGGCGACA GTGCGCTGAT TAAGGTTAAC
AATCCAACCC CTTACTATGC ATCCTTCGCT GCTTTGACCA TCGGTTCAGC CGAAGGCCCT
CCGGAAATGG TGGCCCCGTT CTCTCAATTA GATTTTCCAC TAAACCGAGC GCCAATTAGC
GACAACAAAA CCGTCAATTT TGATTTAATT GATGATTTAG GCAACCGAAA CTCTTTTAGC
CATGAGTTGA AATAA
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| Protein sequence | MTTCRVLTLP ALTIGVLIMS ALATSAVASV IAERTRIVFS EGSTEESLQL VNSNSYPVAV
QVWVDDGNLM ATPDKAVSPI LVLPPVFRLQ PQAQRSLRLI LSGGSKLPAD RESAFWLNIY
EIPPKATPKS GDESFVTLAL RMQYKVFYRP KNLPAPGDIL GKALTFSLER NGDSALIKVN
NPTPYYASFA ALTIGSAEGP PEMVAPFSQL DFPLNRAPIS DNKTVNFDLI DDLGNRNSFS
HELK
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